Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq624 147 2e-30 >seq624 Length=13322 Score = 147 bits (162), Expect = 2e-30 Identities = 304/448 (68%), Gaps = 12/448 (3%) Strand=Plus/Minus Query 57973 GGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATAT 58032 |||| | || || || || ||||| ||||| || || || || |||||| || || | Sbjct 7811 GGCTTGTTGCATTTGCTGCTGTCGAGGGTATCTTTTTCTCAGGATCCTTTGCAGCCATCT 7752 Query 58033 TTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGC 58092 ||||| | |||||||| || || |||||||||||||| || ||||||||||| || | Sbjct 7751 TTTGGCTCAAGAAACGTGGTCTTATGCCCGGCCTGACATTCTCTAACGAGTTGATTTCAC 7692 Query 58093 GCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAAC 58152 | || |||||||| ||||| || ||||| || ||| ||| | | | | | ||||| | Sbjct 7691 GTGATGAGGGTCTTCATACCGACTTTGCTTGTCTATTGTTCACACTCCTCAAGAATAAGC 7632 Query 58153 C----GACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAG 58208 | ||| ||| ||| | | || | |||||||| || || || ||| | ||| Sbjct 7631 CAGCAGACTCGGTTGTGCACC----AAATCTTGACCGAGGCAGTTGCTATTGAACAGGAG 7576 Query 58209 TTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAG 58268 || | ||||| || || || || || || | || ||||| || | ||| | Sbjct 7575 TTCCTGACCGAGGCGCTCCCAGTTGCACTGATTGGCATGAATGCCAATCTCATGAAGAGA 7516 Query 58269 TACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACA 58326 || |||||||||||||| ||| | || || | ||||| | | | | || ||| Sbjct 7515 TATATTGAGTTTGTTGCTGACCGTCTCTTTTTGGAACTCGGGCTCCCCAAAG-CA-TACG 7458 Query 58327 ACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTT 58386 | | ||||| |||||||| ||| | | ||||| || | ||||| || ||||||| Sbjct 7457 GCGTTGAGAATCCATTTGATTTCATGGAAATTATCTCTCTGCAAGGCAAAACCAACTTTT 7398 Query 58387 TCGaaaaaaaaGTTAGCGAATATCAAAA 58414 | ||||| ||| |||| ||||| || Sbjct 7397 TTGAAAAGCGAGTCGGCGAGTATCAGAA 7370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445736544795360