Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1370 107 4e-18 >seq1370 Length=7093 Score = 107 bits (118), Expect = 4e-18 Identities = 186/268 (69%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| || | ||| | || ||||||||||| ||||| || || ||| || ||| Sbjct 5766 TGAATGTTTAAGCCAATACCACCAGCAGTCTTTGAGATCATGGCACATGTCTTTAGGGTA 5707 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893 || || || |||||| |||||| | || | || | ||| || || | ||| Sbjct 5706 GAGTAGATGCCTTCAATGGAATCATCCTCAATGGTGAGCAAGAAACAACTAGACATTTGT 5647 Query 94894 GGTGTGACTGTT-CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952 || ||| | | ||| |||||| || ||||| || || ||||| ||| | | || Sbjct 5646 GGA-TGAGGGGTACCAGCATTAAAGAGCGTGGGTGATGCGTGGGTGAAAAACTTTTCGGA 5588 Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCAC 95012 |||||||| || || |||||| ||| || || ||| ||||||||||| ||||| || Sbjct 5587 CATGAGATTGTAAGTCTCAATGGCAGCTTCGACGTCATCACCGTGAATGCCAACAGCGAC 5528 Query 95013 ACGCATAATCATGTCCTGAGGGCGCTCA 95040 |||||| | ||||| |||||| |||||| Sbjct 5527 ACGCATCAGCATGTGCTGAGGACGCTCA 5500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989516065676890