Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq624 122 1e-22 >seq624 Length=13322 Score = 122 bits (134), Expect = 1e-22 Identities = 303/449 (67%), Gaps = 21/449 (5%) Strand=Plus/Minus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 || || ||||| || || || ||||| ||||| || || || ||||| ||||||||| Sbjct 7809 CTTGTTGCATTTGCTGCTGTCGAGGGTATCTTTTTCTCAGGATCCTTTGCAGCCATCTTT 7750 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||||||||| || || || |||||||| ||||| | ||||||||| || || || Sbjct 7749 TGGCTCAAGAAACGTGGTCTTATGCCCGGCCTGACATTCTCTAACGAGTTGATTTCACGT 7690 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAG 125606 || ||||| || || |||||||| |||| || ||| | ||| | || || Sbjct 7689 GATGAGGGTCTTCATACCGACTTTGCTTGTCTATTG-TTCAC-ACT-----CCTCAAGAA 7637 Query 125607 TGCAGATCCAGCGATGAAAAGGT----CATCAACATTGTAACCGATGCCGTGAGGATAGA 125662 | | ||||| || ||| || ||| || | ||||| || || || || Sbjct 7636 T---AAGCCAGC--AGACTCGGTTGTGCACCAA-ATCTTGACCGAGGCAGTTGCTATTGA 7583 Query 125663 ACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCA-TGATTGGCATGAACTGCAAGCTAA 125721 ||| ||||| || ||||| | || || || ||| ||||||||||||| ||| || | Sbjct 7582 ACAGGAGTTCCTGACCGAGGCGCTCCCAGT-TGCACTGATTGGCATGAATGCCAATCTCA 7524 Query 125722 TG-TGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAG 125780 || | || || || |||||||| || || ||||| | | || | || ||| Sbjct 7523 TGAAGAGA-TATATTGAGTTTGTTGCTGACCGTCTCTTTTTGGAACTCGGGCTCCCCAAA 7465 Query 125781 ATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACC 125840 ||| || ||||||| |||||||||||| | || || || | || || ||| Sbjct 7464 GCATACGGCGTTGAGAATCCATTTGATTTCATGGAAATTATCTCTCTGCAAGGCAAAACC 7405 Query 125841 AACTTTTTCGAGAAGAAGGTCAGCGAGTA 125869 |||||||| || ||| ||| ||||||| Sbjct 7404 AACTTTTTTGAAAAGCGAGTCGGCGAGTA 7376 Score = 98.7 bits (108), Expect = 1e-15 Identities = 191/277 (69%), Gaps = 4/277 (1%) Strand=Plus/Minus Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCC 125081 ||| | ||||||||||| || | || || || ||||| | ||| || || || || || Sbjct 8373 TGGAACATGTACAAAAAAGCAGAAGCTTCTTTCTGGACTGCCGAGGAAGTAGACCTTTCA 8314 Query 125082 AAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCAC 125141 || ||| || ||||| ||| | ||||| ||| || | ||||| || | Sbjct 8313 AAAGACACCATTGACTGGGAAGAGCGTCTTACTGATGATGAACGCTACTTTATTTCTCGT 8254 Query 125142 ATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACGATT 125200 | |||||||| || || | ||| ||||| || || || || |||| |||||| ||||| Sbjct 8253 GTGTTGGCCTTTTTCGCTGCCTCTGATGGCATTGTTAATGAGAATCTTGTTGA-GCGATT 8195 Query 125201 CTCTCAAGA-GTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTG 125259 |||||||| ||| | || | || | | | || ||||| ||||| |||||||||| Sbjct 8194 TTCTCAAGATGTTCAAATTTTCGAAGCTCGC-TATTTCTACGGCTTCCAGATCATGATTG 8136 Query 125260 AGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296 | ||| | ||| || |||||||| | ||||||| Sbjct 8135 AAAACATCCACAGTGAGATGTACTCGCTATTGATTGA 8099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741009567560080