Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq624 158 1e-33 >seq624 Length=13322 Score = 158 bits (174), Expect = 1e-33 Identities = 206/282 (73%), Gaps = 5/282 (2%) Strand=Plus/Plus Query 93365 TATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAAT 93424 |||||||| || || || || ||||| ||| |||| || || || || ||||| Sbjct 8093 TATGTATCAATCAATAGCGAGTACATCTCACTGTGGATGTTTTCAATCATGATCTGGAAG 8152 Query 93425 CCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTT 93484 ||||||||| | | |||||| || || || ||||||||||||| ||| || ||||| Sbjct 8153 CCGTAGAAATAGCGAGCTTCGAAAATTTGAACATCTTGAGAAAATCGCTCAACAAGATTC 8212 Query 93485 TCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTC 93544 ||||| || || ||||| || || || ||||| ||||| | | | ||||| | Sbjct 8213 TCATTAACAATGCCATCAGAGGCAGCGAAAAAGGCCAACACACGAGAAATAAAGTAGCGT 8272 Query 93545 TCATCATCTTTAA---GCTTATCCCAATCGGATAG-ATCTTTTGAAAGATCGACTTCTTC 93600 |||||||| ||| ||| ||||| || || | ||||||||||| || ||||| || Sbjct 8273 TCATCATCAGTAAGACGCTCTTCCCAGTC-AATGGTGTCTTTTGAAAGGTCTACTTCCTC 8331 Query 93601 GACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCA 93642 | ||||||| || || |||||||||||||||||||| | ||| Sbjct 8332 GGCAGTCCAGAAAGAAGCTTCTGCTTTTTTGTACATGTTCCA 8373 Score = 113 bits (124), Expect = 5e-20 Identities = 169/237 (71%), Gaps = 6/237 (3%) Strand=Plus/Plus Query 93081 TGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGC 93140 || ||| || || |||||||||||||| | ||| || || ||||| |||||||| || Sbjct 7650 TGAACAATAGACAAGCAAAGTCGGTATGAAGACCCTCATCACGTGAAATCAACTCGTTAG 7709 Query 93141 TGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTAC 93200 |||||| | || || | || || ||||||||||||||||| || | ||||| | Sbjct 7710 AGAATGTCAGGCCGGGCATAAGACCACGTTTCTTGAGCCAAAAGATGGCTGCAAAGGATC 7769 Query 93201 CAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG--- 93257 | || ||||| ||||| || || || |||||||| |||| || | |||| ||| Sbjct 7770 CTGAGAAAAAGATACCCTCGACAGCAGCAAATGCAACAAGCCGCACTCCAAAGCTTGATT 7829 Query 93258 CGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTA 93314 | | || | | |||||| || | ||||| ||||| ||||| ||| ||||||| Sbjct 7830 CCGTAT--CCG-AGATCCACTTGAGTGCCCAGTCGGCCTTTTTGCGAATGCAAGGTA 7883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556823504247920