Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq928 136 9e-27 seq1440 100 6e-16 >seq928 Length=10049 Score = 136 bits (150), Expect = 9e-27 Identities = 472/731 (65%), Gaps = 24/731 (3%) Strand=Plus/Plus Query 333627 TCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTGGTCTTCGTC 333686 ||||| || ||||||| || | || |||||||| |||||||| | | | || || Sbjct 2252 TCCTTGGACTTGATACCTTCCAAAAAGCCGGGCTCAGGGAACTTGAAAGAGAACTGAGTG 2311 Query 333687 TCGGTAAGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTT 333746 | | ||| |||||||| | || || |||| || || |||| ||||| || Sbjct 2312 GCAGAAAGCTCGTAGTAAGAGCGGGCCTCAGGGCGCTGCTCAACAAACTTGGACAAGTTG 2371 Query 333747 CCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCG 333806 |||||||| |||| || ||| |||| ||||| || ||||| |||||| ||| Sbjct 2372 CCCTTGTAGGTCTTGAGTTTTCGGTTC---TCGTAGTGTATAATGTGGGTGCAGACACGA 2428 Query 333807 TCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGG 333866 || ||||| || || ||||| || || | | | | |||| || |||| | ||| Sbjct 2429 TCAAGGAAACCAGAATCGTGCGAGACGACGAGAGATGTGACGTTGGGAATGTTGTTGAGG 2488 Query 333867 TATTCAATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGT 333926 || || ||||| | ||||| ||| | || ||||| |||||||| | || Sbjct 2489 TAATCCTCGAGCCATTTGACGTTCTTGACATCCAAGTGATTGGTAGGCTCGTCCAATAGC 2548 Query 333927 AGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCT 333986 || | | || ||| ||||| ||||| ||||| |||| ||||| ||||| || || Sbjct 2549 AGAATGTCAGCATTCTCAAGCATCGCACGAGCAAGCTCGAGCTTCATCTTCCAGCCACCA 2608 Query 333987 GAAAGAGTGTTAATTG---GGGCAGATTGGCGCTCAATATCAAAGCCAACCGATTCTAGA 334043 ||||| | | || | ||||| | || ||| ||| || || || |||| || Sbjct 2609 GAAAGCGAGCCAACAGCCTGGGCAA---GACGGTCATCATCGAACCCGACAGATTGGAGG 2665 Query 334044 GTAGTTACGATCTTTTCACGAGACCAAATGTTTTCCTTTACTTGTTCATCATTGGCAATG 334103 || | || | || ||| | || ||| |||| ||| | | || | Sbjct 2666 GTCTTGGTGACATCCCCA-GAGTCAAA--------CTTG--TTGTCCATAA--GACA--G 2710 Query 334104 AAGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTT 334163 || || | | | | | | ||| || | | | | || || || | |||| Sbjct 2711 AATTCCAAAACGGAAAGATCGGCATCAGATGCCTGCAAGTTATGCTCGACAAAGACAGTC 2770 Query 334164 TTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGA 334223 || | | ||||||| ||||| || |||||||| || || |||| || ||||||||| Sbjct 2771 TTGAGTTCGTCCGCAGGAGGGAAACCGTCAAGCTGTCCATTAGCAATGGCACGCATCAGA 2830 Query 334224 GTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTG 334283 || || || || | ||||| || ||||| ||||||||| || ||||| | ||| | Sbjct 2831 GTGGACTTTCCGACACCGTTGGGACCACAGAGACCGTAGATCTTGCCACGAGTAAGACGG 2890 Query 334284 AACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACAC 334343 ||| || |||||| ||||| | |||||||| || ||||| || ||||| | || Sbjct 2891 AACTTGGTGCTGTTCAATAGAATCATACCACCATAAGCGAGAGAGAACTCACAGTTGCAG 2950 Query 334344 AGATCCTCACC 334354 || |||||||| Sbjct 2951 AGCTCCTCACC 2961 >seq1440 Length=6742 Score = 100 bits (110), Expect = 6e-16 Identities = 191/281 (68%), Gaps = 3/281 (1%) Strand=Plus/Plus Query 333714 TCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTA 333773 || || ||||||| || |||| |||||| ||||||||||| | |||||| || Sbjct 1879 TCTGGGCGCTTCTCAACAAACTTGGACAGGTTTCCCTTGTAATAGGCCAGCTT---CTTC 1935 Query 333774 GGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACA 333833 | || || || || ||| ||||| ||| ||| | || |||||||| || ||| Sbjct 1936 TGCTCATAGTGAATGATATGAGTGCAGACATTGTCCAAAAAGGTCGAGTCGTGCGAAACA 1995 Query 333834 ATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGAC 333893 | | ||| | || ||||| || | | || || || | ||||||| |||||| | Sbjct 1996 GTGATGCAGGTCACCTCCTTTTGGCTAACGAGATACTCTACCAGCCACGCCACGTTGGCA 2055 Query 333894 ACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCA 333953 ||| ||||| || || || || |||||||| || | | || || |||||| ||| Sbjct 2056 ACATCCAGATGATTCGTAGGTTCATCAAGAAGAAGAATGTCAGCTTTGGTGAGCATGGCA 2115 Query 333954 CGTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAGAGT 333994 || || || | || ||||| ||||| || || || ||||| Sbjct 2116 CGAGCCAGTTCCAGCTTCATCTTCCAACCACCCGAGAGAGT 2156 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 333336 TAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATCCTCGATGTGGTGGAAA 333395 |||||||||||||||||||| || || ||| | || | ||| | || | |||||||| Sbjct 1501 TAACGCCATTGGATATACTGATTAGGGGTCTTTTCTAAATGCTGTTCTAGATGGTGGAAT 1560 Query 333396 GCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCAAAC 333442 ||||||||||| ||||| | | ||||| ||| || |||||||| || Sbjct 1561 GCATGCTGTGCAACGTAGCCTACACGCAGATTGGGGTGCTTCCACAC 1607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102804287977300