Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq3174 86.0 4e-12 >seq3174 Length=2562 Score = 86.0 bits (94), Expect = 4e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 15020 CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCT 15079 |||| || | ||| || ||||| | || | |||||| ||||| ||| |||||||||| Sbjct 1831 CGTCCTCGAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGTGGGATTCCTTCCT 1772 Query 15080 TGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAA 15139 |||| ||| ||| || ||| | || |||||||| | ||||| || | ||| | Sbjct 1771 TGTCTTGAATCTTGGCCTTGACATTGTCAATAGTATCAGAAGACTCTACCTCAAGGGTGA 1712 Query 15140 TGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 |||| || || ||||| || || || || |||||||| Sbjct 1711 TGGTCTTGCCAGTCAGGGTCTTGACGAATATTTGCAT 1675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357368662079030