Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq274 132 1e-25 seq1447 114 3e-20 >seq274 Length=20666 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || |||||||| ||||| ||||| || |||| ||||| || | | ||| Sbjct 19206 CGAAGGCGGAGAACAAGGTGAAGAGTAGACTCTTTCTGGATATTGTAATCCGAAAGAGTA 19147 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || ||||||||||| ||||| || | |||||||||||| || ||||| Sbjct 19146 CGGCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCAGGGGGGATTCCC 19087 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| ||| || || | |||||| | || || || ||||| Sbjct 19086 TCTTTATCTTGGATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCGACTTCCAAG 19027 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||||||||| || || || ||||| ||||| Sbjct 19026 GTGATTGTCTTACCCGTAAGGGTCTTGACAAAGATTTG 18989 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || ||||| ||||||||| | || ||||| | ||| | | |||||||| |||||||| Sbjct 19115 ATTTTCGCTGGAAAGCAGCTTGAGGATGGCCGTACTCTTTCGGATTACAATATCCAGAAA 19174 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 ||||||||||||||||||||| | | ||||| Sbjct 19175 GAGTCTACTCTTCACCTTGTTCTCCGCCTTCG 19206 >seq1447 Length=6688 Score = 114 bits (126), Expect = 3e-20 Identities = 102/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| ||||| |||||||| |||| ||||||||| | | ||| | || ||| Sbjct 2198 AGAACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCTGAAAGAGTACGGCCGTCT 2257 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||| || |||||||||||||| ||| ||||| ||| ||| Sbjct 2258 TCAAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGGATTCCCTCTTTATCC 2317 Query 199538 TGAATCTT 199545 |||||||| Sbjct 2318 TGAATCTT 2325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178840667768986