Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq624 114 1e-20 seq274 87.8 2e-12 >seq624 Length=13322 Score = 114 bits (126), Expect = 1e-20 Identities = 184/264 (70%), Gaps = 3/264 (1%) Strand=Plus/Plus Query 133185 CGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGC 133244 ||| ||||| || ||| | ||| || || ||| || |||||||| || | || || Sbjct 8110 CGAGTACATCTCACTGTGGATGTTTTCAATCATGATCTGGAAGCCGTAGAAATAGCGAGC 8169 Query 133245 CTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTC 133304 |||| | || || ||||||| || ||||| || ||||| || || || ||||| || Sbjct 8170 TTCGAAAATTTGAACATCTTGAGAAAATCGCTCAACAAGATTCTCATTAACAATGCCATC 8229 Query 133305 GCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG 133364 ||| ||||||||||||| ||| | || || | ||| || | || | | || Sbjct 8230 AGAGGCAGCGAAAAAGGCCAACACACGAGAAATAAAGTAGCGTTCATCATCAGTAAGACG 8289 Query 133365 C---TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGC 133421 | |||||||| ||||| || || ||||| || |||||| | ||||| || || || Sbjct 8290 CTCTTCCCAGTCAATGGTGTCTTTTGAAAGGTCTACTTCCTCGGCAGTCCAGAAAGAAGC 8349 Query 133422 CTCGGCTTTTTTGTACATACTCCA 133445 || |||||||||||||| |||| Sbjct 8350 TTCTGCTTTTTTGTACATGTTCCA 8373 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 |||||| | |||||||||||| ||| | ||||| || | ||||| | ||||| Sbjct 7650 TGAACAATAGACAAGCAAAGTCGGTATGAAGACCCTCATCACGTGAAATCAACTCGTTAG 7709 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 ||| |||| ||||||||| || || ||||| ||||||||||| ||||| || || | Sbjct 7710 AGAATGTCAGGCCGGGCATAAGACCACGTTTCTTGAGCCAAAAGATGGCTGCAAAGGATC 7769 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT 133063 | || || |||| |||||||| || || || || || || ||| | || || | | || Sbjct 7770 CTGAGAAAAAGATACCCTCGACAGCAGCAAATGCAACAAGCCGCACTCCAAAGCTTGATT 7829 Query 133064 CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTT 133102 | | | |||||| || ||||| |||||||||| Sbjct 7830 CCGTATCCGAGATCCACTTGAGTGCCCAGTCGGCCTTTT 7868 >seq274 Length=20666 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || ||||| || || |||||| | || |||||| | || Sbjct 18986 ATGCAAATCTTTGTCAAGACCCTTACGGGTAAGACAATCACCTTGGAAGTCGAGTCATCC 19045 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| || ||||||||||| ||| | ||||| Sbjct 19046 GACACCATTGATAATGTCAAGGCCAAGATCCAAGATAAAGAGGGAATCCCCCCTGACCAG 19105 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | |||| ||| || || ||||| || || | || || || || ||||| Sbjct 19106 CAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGATGGCCGTACTCTTTCGGATTACAAT 19165 Query 38424 ATCCAAAAGGA 38434 ||||| || || Sbjct 19166 ATCCAGAAAGA 19176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500139300926720