Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq2011 192 4e-43 seq441 102 6e-16 seq1247 91.5 1e-12 >seq2011 Length=4578 Score = 192 bits (212), Expect = 4e-43 Identities = 939/1479 (63%), Gaps = 20/1479 (1%) Strand=Plus/Plus Query 517214 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 517273 || || || || || || |||||| | || | || ||| | || | || || ||| Sbjct 829 TTTGTGATGGTGATCTTGTTGGATCGGCCAGTAGTCTTGTCAACAGCGTTAACGTTGAGA 888 Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 ||||| |||||||| | |||||| || ||||||| || ||||| || | | || || Sbjct 889 ATACCGTTGGCATCGACATCAAAGGTCACTTCAACCTGGGGGACACCACGGGGGGCGGGA 948 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 ||||| || | | ||| | || || || || || || || | || ||| Sbjct 949 GGGATACCAGAGAGTTCAAACTTGCCGAGCAAGTTGTTGTCCTTGGTACGGGTACGCTCA 1008 Query 517394 CCCTCGAAAATTTGGATAGTAACTACA---GTTTGATTATCTGAATAAGTTGTAAATACT 517450 || || || | || || |||| ||| | || || || | ||| || | || ||| Sbjct 1009 CCTTCAAAGACCTGAAT--TAAC-ACACCGGGCTGGTTGTCAGCATAGGTGGAGAAGACT 1065 Query 517451 CTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCT 517510 || || || || | || ||||| | | || | | |||||| | ||| || Sbjct 1066 TCAGACTTCTTTGTGGGGACAGTAGTGTTACGCTTGATGAGAGGGGTCATCACACCGCCA 1125 Query 517511 GCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTT 517570 || || || | ||| ||||| ||||| | ||||| | | | | | || || Sbjct 1126 GCAGTCTCGATACCGAGAGATAGAGGGGCCACATCGAGCAAAAGCAAGTCCTGGGTCTTC 1185 Query 517571 TCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 517630 || || | |||| ||||| || || |||| || ||||||||||||||||| ||| Sbjct 1186 TCTGAGGTATCACCAGTGAGAATGGCAGCCTGAACGGCGGCACCATATGCAACAGCCTCA 1245 Query 517631 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT 517690 || || || | | | || | | || || |||||| | | || | || | ||| Sbjct 1246 TCGGGGTTGATCGACTTGTTGGGCTCCTTTCCGTTGAAATAGTCGGAGATGAGCT-TCTG 1304 Query 517691 AC-CTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATC 517749 | ||| |||||||| | ||||| ||||| | |||| ||| || || || || Sbjct 1305 AATCTTGGGAATACGGGTAGATCCACCAACAAGAACAACTTCGTGGACAGAGCCCTTGTC 1364 Query 517750 CAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGA 517809 | ||| || || | ||| || |||||||| |||| | | || | || | Sbjct 1365 AATTTTAGAGTCACGGAGAACCTTGTCAACGGGGTCAATGGTTCCACGGAAGAGATCAGC 1424 Query 517810 ACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAA 517869 || || || ||||| ||| | || | | | || | |||| |||||||| | Sbjct 1425 GCAGAGCTCCTCGAAACGAGCACGGGTGATGGAGGTATAGAAGTCAACACCTTCGAAAAG 1484 Query 517870 AGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACA 517929 ||| || | ||| || | ||| |||| | ||| ||||| | || || ||||| || || Sbjct 1485 AGAGTCGATTTCGATGGAAGTCTGAGCGGCAGATGATAGAGTGCGCTTTGCACGCTCGCA 1544 Query 517930 TGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTT 517987 || || | || | || | || | | ||| | | | ||| | || || ||| Sbjct 1545 AGCAGTACGGAGACGACGGAGAGCACGGG--GGTTGGAAGTAAGATCCTTCTTGTACTTT 1602 Query 517988 CTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAAT 518047 | |||||| || ||| | | |||||||| || ||||| || ||||| || | Sbjct 1603 CGCTTGAACTCGTCAGAGAAGTGAGAAACAAGACGGTTGTCAAAGTCCTCACCACCAAGA 1662 Query 518048 TTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTT 518107 | ||| | || | || || | || | || | ||||| |||| || | || | Sbjct 1663 TGAGTGTCACCAGCAGTGGCCTTGACCTCAAAGATACCATCCTCAATAGTGAGGAGGGAG 1722 Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 518167 |||||| || |||||||| | ||| ||||| || || ||| |||| | | || Sbjct 1723 ACATCAAAAGTACCACCACCAAGATCGAAAATGAGAACGTTCTTTTCGCCGGCAGTCTTC 1782 Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || |||||||| || |||| ||||| ||||| || || ||||| || | | ||||| Sbjct 1783 TTGTCAAGACCGTAGGCAATGGCAGCTGCAGTAGGCTCGTTAATGATACGGAGGACATTG 1842 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 || |||| ||| || ||||| || || || || | || || ||||| || || || Sbjct 1843 AGGCCAGAAATGACACCAGCATCCTTGGTAGCCTGACGCTGGGAGTCGTTGAAGTAAGCG 1902 Query 518288 GGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTC 518347 || ||||| | ||||||||| | || | || | ||||| || || | ||| Sbjct 1903 GGGACAGTGACAACGGCATCCTTGACAGTGGTGCCGAGGTAAGCTTCGGCAGTCTCCTTC 1962 Query 518348 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATT-TTG 518406 || ||| | || ||| |||||||| | || |||| | ||||| ||| ||| Sbjct 1963 ATCTTAAGGAGAACCATGGATGAAATCTCCTCGGGGGTGAAAGTCTTGGTCTCACCCTTG 2022 Query 518407 ATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTT 518466 | | | || | || ||| || ||| || | || || || | ||||| || Sbjct 2023 AACTCAACCTGGATGAT-TGGCTTTCCACCCTTGTTGACGACCTTGAAGGACCAGTGCTT 2081 Query 518467 CATATCTGATTGAACACTTTGGTCAT--TAAAATCT-CTACCAATTAATCGTTTTGCATC 518523 ||| || || ||||| || | ||| | ||||| | ||| || || || || || || Sbjct 2082 CATGTCAGACTGAAC-CTCAG--CATCCTCAAATCGACGACCGATCAAACGCTTGGCGTC 2138 Query 518524 AAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATG 518583 ||| | || ||||| || || || || | || | ||||| ||||| ||||| ||| | Sbjct 2139 AAAGACGGTGTTGGTGGGGTTCATGGCGACCTGGTTCTTGGCGGCATCACCAATGAGACG 2198 Query 518584 TTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAAT 518643 || | || | || ||||||||||||||| ||||| || || || || || ||||| Sbjct 2199 CTCGCTGTCAGAGAAACCAACATATGATGGAGTAGTGCGGTTTCCCTGGTCGTTGGCAAT 2258 Query 518644 AATTTCAACTTTACCATTTTGCCATACACCTACACAACT 518682 || ||||| | |||||||| || || ||||| || Sbjct 2259 GATCTCAACACGGTCGTTTTGCCAAACGCCGACACATCT 2297 >seq441 Length=16304 Score = 102 bits (112), Expect = 6e-16 Identities = 170/246 (69%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 518441 TTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT 518500 |||| ||| ||||||||||| | |||||| || | |||||| | ||| | ||| Sbjct 1945 TTAACAACCTTAAATGGCCAATGTTTCATGTCAGCCTGAACATCCTTGTCGTCAAATCGG 2004 Query 518501 CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATAT 518560 | ||||| | || || |||||||| || |||||| ||| || | ||| || | Sbjct 2005 CGACCAACCAGACGCTTGGCATCAAAGATGGTATTGAATGGGTTCGAGGGAGCCTGGTTC 2064 Query 518561 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 518620 || || | ||| |||| ||| | || | || ||||| | ||||| || ||||| | Sbjct 2065 TTTGCAGGATCACCAACAAGACGCTCATTGTCGGTAAAGGCGACATAAGAGGGAGTGATA 2124 Query 518621 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 518680 || ||||| || || || |||||||||||||| |||||| | | || || ||||| Sbjct 2125 CGGTTACCCTGGTCGTTGGCAATAATTTCAACACGACCATTCTTGAAAACTCCAACACAG 2184 Query 518681 CTAAAA 518686 ||| || Sbjct 2185 CTACAA 2190 >seq1247 Length=7761 Score = 91.5 bits (100), Expect = 1e-12 Identities = 108/145 (74%), Gaps = 1/145 (1%) Strand=Plus/Plus Query 366979 AATAAAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGAT 367038 |||| ||| | ||| | ||||| || || || ||||| ||||| ||| ||||| | || Sbjct 6028 AATATAATTCATATTATTGTAGCAACGATTGCGTTTGGCATGGGGATTGATAAATCAGAC 6087 Query 367039 GTTAGAGTTGTTATTCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATT 367098 ||| || ||||||| ||||| ||| | | | ||||||| |||||||| |||| Sbjct 6088 GTTCGATTTGTTATCCATTACTCTATTCCACAAAGTCTTGAAGGGTATTATCAGGAAACC 6147 Query 367099 GGTAGAGCAGGTCGTGATGGAGAAA 367123 ||| | |||||||||||||| |||| Sbjct 6148 GGTCGCGCAGGTCGTGATGG-GAAA 6171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780556518390748