Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq20 123 3e-23 >seq20 Length=44785 Score = 123 bits (136), Expect = 3e-23 Identities = 320/481 (67%), Gaps = 10/481 (2%) Strand=Plus/Plus Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACCAT 159363 || || ||| | || |||||||||| || | |||||| | ||| |||| || | | Sbjct 16882 CAGCCCAACTCGGGTGCACAGGGTGAATACACTGGACTGCGGGTGATCAAAGCGTATCTT 16941 Query 159364 CAAG-GATCAGGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAAC 159422 || |||| || | | | | | |||| ||| |||| |||| ||||||||| || || Sbjct 16942 GAATCGATC-GGTCAAGGTCAGCGTGATGTGTGTCTGATCCCAGTGTCAGCACACGGTAC 17000 Query 159423 TAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGA 159482 || || ||||| || ||| || |||| || || |||||||| ||||| | Sbjct 17001 CAACCCAGCATCCGCCACCATGTGTGGTCTGAAGGTGGTGACGGTCAAGTGCGATGAAGC 17060 Query 159483 TGGCAACATAGACATCAAAGATCTA-GAGAAGAAAGCAATCATGAATACATTTGAAC--- 159538 || ||| | || | | ||||| ||| | ||| | || |||| || | Sbjct 17061 CGGTAACTTGGATCTGGAGGATCTGCGAGCCAAGAGCGACCAG---TACAAG-GATCGCT 17116 Query 159539 TGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGAC 159598 || || | |||||||| || ||||| || ||||||| |||||| | ||||| Sbjct 17117 TGGCAGCGACCATGATTACCTACCCATCGACCTATGGTGTGTTTGAAGCTGGCATCAAGG 17176 Query 159599 AGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAA 159658 | || |||| | || | | ||||| || || ||| | |||||||| ||||| | Sbjct 17177 AAGCCTGCGAGATCATCCACCAACACGGTGGACAAGTCTATATGGATGGTGCTAATCTGA 17236 Query 159659 ATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACT 159718 | || ||| | || || ||||| ||| ||||| || || || ||| | ||| Sbjct 17237 ACGCGCAGATGGGGCTTTGCAAACCTGCTGAAATCGGTGCTGACGTGTGCCATTTGAACC 17296 Query 159719 TACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTG 159778 | || ||||| || || |||||||| || ||||| ||||||||| | ||||||||||||| Sbjct 17297 TCCACAAGACCTTTTGCATTCCACACGGCGGTGGTGGTCCTGGCATGGGTCCTATTGGTG 17356 Query 159779 T 159779 | Sbjct 17357 T 17357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588011815270880