Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq20 129 7e-25 >seq20 Length=44785 Score = 129 bits (142), Expect = 7e-25 Identities = 321/481 (67%), Gaps = 10/481 (2%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 |||||||||||||| | ||||||||| ||||| || |||||||| || || ||||| || Sbjct 17357 ACACCAATAGGACCCATGCCAGGACCACCACCGCCGTGTGGAATGCAAAAGGTCTTGTGG 17298 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || | ||| || || || ||||| ||| ||||| || || | ||| || Sbjct 17297 AGGTTCAAATGGCACACGTCAGCACCGATTTCAGCAGGTTTGCAAAGCCCCATCTGCGCG 17238 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || ||||| |||||||| | ||| || || ||||| | | || | ||||| || Sbjct 17237 TTCAGATTAGCACCATCCATATAGACTTGTCCACCGTGTTGGTGGATGATCTCGCAGGCT 17178 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATG-- 138420 | ||||| | |||||| ||||||| |||||||| || |||||||| | || Sbjct 17177 TCCTTGATGCCAGCTTCAAACACACCATAGGTCGATGGGTAGGTAATCATGGTCGCTGCC 17118 Query 138421 -AGAGTTCAAATGTATTCATGATTGCTTTCTTCTC-TAGATCTTTGATGTCTATGTTGCC 138478 || | || |||| || | ||| | ||| ||||| | | || | ||| || Sbjct 17117 AAGCGATC-CTTGTA---CTGGTCGCTCTTGGCTCGCAGATCCTCCAGATCCAAGTTACC 17062 Query 138479 ATCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATT 138538 | ||||| |||||||| || || |||| || |||| || || || || Sbjct 17061 GGCTTCATCGCACTTGACCGTCACCACCTTCAGACCACACATGGTGGCGGATGCTGGGTT 17002 Query 138539 AGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATCTCCTGATC-CTT 138597 || || ||||||||| |||| |||||||| |||| | | | | | || |||| || Sbjct 17001 GGTACCGTGTGCTGACACTGGGATCAGACACACATCACGCTGACCTTGACC-GATCGATT 16943 Query 138598 GATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGTT 138657 | |||| |||| ||| | |||||| | || |||||||||| || | ||| || | Sbjct 16942 CAAGATACGCTTTGATCACCCGCAGTCCAGTGTATTCACCCTGTGCACCCGAGTTGGGCT 16883 Query 138658 G 138658 | Sbjct 16882 G 16882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578959621582160