Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq274 104 4e-17 seq3174 100 5e-16 >seq274 Length=20666 Score = 104 bits (114), Expect = 4e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || || || || || | |||| |||||| ||||| || || || | || | | Sbjct 19200 CGGAGAACAAGGTGAAGAGTAGACTCTTTCTGGATATTGTAATCCGAAAGAGTACGGCCA 19141 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | || ||||| || ||||| || | ||| || ||||| || ||||| |||||| Sbjct 19140 TCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCAGGGGGGATTCCCTCTTTA 19081 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || |||| || | ||| ||| || ||||| ||||| ||||| | || || Sbjct 19080 TCTTGGATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCGACTTCCAAGGTGATT 19021 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||| || || || || ||||| |||||||| Sbjct 19020 GTCTTACCCGTAAGGGTCTTGACAAAGATTTGCAT 18986 >seq3174 Length=2562 Score = 100 bits (110), Expect = 5e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||| ||||| ||||| || | | ||| || ||||| || |||||||| || Sbjct 1829 TCCTCGAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGTGGGATTCCTTCCTTG 1770 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || |||| || | ||| ||||||||| |||||||| || || || || || Sbjct 1769 TCTTGAATCTTGGCCTTGACATTGTCAATAGTATCAGAAGACTCTACCTCAAGGGTGATG 1710 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || ||||||||||| Sbjct 1709 GTCTTGCCAGTCAGGGTCTTGACGAATATTTGCAT 1675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899594145646560