Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq5357 100 3e-15 seq624 96.9 4e-14 >seq5357 Length=1003 Score = 100 bits (110), Expect = 3e-15 Identities = 81/98 (83%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521 ||||| || ||||| |||||||||| ||||| | ||||||||| || || ||| ||| Sbjct 25 ATGTCATTAACAAAGGAGTTCATGATGGACATGGCCTTGTTGGAAATACCAGTGTCAGGG 84 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 ||||||||||||||||||||||||||| | | ||||| Sbjct 85 TGCACCTGCTTGAGCACCTTGTAGATGTAGGTAGAGTA 122 >seq624 Length=13322 Score = 96.9 bits (106), Expect = 4e-14 Identities = 118/156 (76%), Gaps = 5/156 (3%) Strand=Plus/Plus Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGC-GCAGAAACTGCCCGAGAA 869274 ||||||||||| || || || |||||||||||||||||||| ||| || || ||||| Sbjct 7718 AGGCCGGGCATAAGACCACGTTTCTTGAGCCAAAAGATGGCTGCA-AAGGATCCTGAGAA 7776 Query 869275 AAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTC 869334 |||||| |||||||| || ||||| | | |||||| | ||||| | || || | Sbjct 7777 AAAGATACCCTCGACAGCAGCAAATGCAACAAGCCGCACTCCAAAG--CTTGATTCCGT- 7833 Query 869335 CTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTT 869370 | ||||||||| | ||||||||||||||||| Sbjct 7834 ATCCGAGATCCACTTGAGTGCCCAGTCGGCCTTTTT 7869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106699497428486