Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq441 105 5e-17 seq1247 96.9 3e-14 >seq441 Length=16304 Score = 105 bits (116), Expect = 5e-17 Identities = 171/246 (70%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 282608 TTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT 282667 |||| ||| ||||||||||||| |||||| || | |||||| | ||| | ||| Sbjct 1945 TTAACAACCTTAAATGGCCAATGTTTCATGTCAGCCTGAACATCCTTGTCGTCAAATCGG 2004 Query 282668 CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATAT 282727 | ||||| | || || |||||||| || |||||| ||| || | ||| || | Sbjct 2005 CGACCAACCAGACGCTTGGCATCAAAGATGGTATTGAATGGGTTCGAGGGAGCCTGGTTC 2064 Query 282728 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 282787 || || | ||| |||| ||| | || | || ||||| | ||||| || ||||| | Sbjct 2065 TTTGCAGGATCACCAACAAGACGCTCATTGTCGGTAAAGGCGACATAAGAGGGAGTGATA 2124 Query 282788 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 282847 || ||||| || || || |||||||||||||| |||||| | | || || ||||| Sbjct 2125 CGGTTACCCTGGTCGTTGGCAATAATTTCAACACGACCATTCTTGAAAACTCCAACACAG 2184 Query 282848 CTAAAA 282853 ||| || Sbjct 2185 CTACAA 2190 >seq1247 Length=7761 Score = 96.9 bits (106), Expect = 3e-14 Identities = 109/145 (75%), Gaps = 1/145 (1%) Strand=Plus/Plus Query 131162 AATAAAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGAT 131221 |||| ||| | ||| | ||||| || || || ||||| ||||| ||| ||||| | || Sbjct 6028 AATATAATTCATATTATTGTAGCAACGATTGCGTTTGGCATGGGGATTGATAAATCAGAC 6087 Query 131222 GTTAGAGTTGTTATTCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATT 131281 ||| || ||||||| |||||| ||| | | | ||||||| |||||||| |||| Sbjct 6088 GTTCGATTTGTTATCCATTACTCTATTCCACAAAGTCTTGAAGGGTATTATCAGGAAACC 6147 Query 131282 GGTAGAGCAGGTCGTGATGGAGAAA 131306 ||| | |||||||||||||| |||| Sbjct 6148 GGTCGCGCAGGTCGTGATGG-GAAA 6171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740367344842908