Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq3174 136 8e-27 >seq3174 Length=2562 Score = 136 bits (150), Expect = 8e-27 Identities = 134/173 (77%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 82639 CAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTG 82698 |||| ||| | | ||||| || ||||| |||||||||||||| || | || || || | Sbjct 1846 CAGAAAGAGTGCGGCCGTCCTCGAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCAG 1787 Query 82699 GAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTT 82758 | || ||||||||||| ||||||||||| || || ||||| ||||| |||||| || | Sbjct 1786 GTGGGATTCCTTCCTTGTCTTGAATCTTGGCCTTGACATTGTCAATAGTATCAGAAGACT 1727 Query 82759 CTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||| || | || || |||||||| |||| ||||| || ||||| |||||| Sbjct 1726 CTACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAATATTTGCATT 1674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981759798176362