Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq274 84.2 1e-11 >seq274 Length=20666 Score = 84.2 bits (92), Expect = 1e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| |||||| || || |||||||| || || || || | || || | || Sbjct 19188 TGAAGAGTAGACTCTTTCTGGATATTGTAATCCGAAAGAGTACGGCCATCCTCAAGCTGC 19129 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 ||||| || ||||||||||||||||| || | || | || ||||| || || || Sbjct 19128 TTTCCAGCGAAAATCAAACGCTGCTGGTCAGGGGGGATTCCCTCTTTATCTTGGATCTT- 19070 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | | |||| || | ||||||| ||| || || || | ||||| || ||||| || Sbjct 19069 GGCCTTGACATTATCAATGGTGTCGGATGACTCGACTTCCAAGGTGATTGTCTTACCCGT 19010 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 | || || |||||||| |||||| Sbjct 19009 AAGGGTCTTGACAAAGATTTGCATA 18985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328682535423360