Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq274 109 1e-18 seq1447 87.8 4e-12 >seq274 Length=20666 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || || || || || || ||||| |||||||| || || ||| Sbjct 18989 CAAATCTTTGTCAAGACCCTTACGGGTAAGACAATCACCTTGGAAGTCGAGTCATCCGAC 19048 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| ||||| ||||| ||||| || ||| || Sbjct 19049 ACCATTGATAATGTCAAGGCCAAGATCCAAGATAAAGAGGGAATCCCCCCTGACCAGCAG 19108 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | || ||||| ||||||||| | || ||||| | ||| | | |||||||| || Sbjct 19109 CGTTTGATTTTCGCTGGAAAGCAGCTTGAGGATGGCCGTACTCTTTCGGATTACAATATC 19168 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||||||||||||||||||||||||| | | ||||| Sbjct 19169 CAGAAAGAGTCTACTCTTCACCTTGTTCTCCGCCTTCG 19206 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||| | | ||||||||||||||||||||||||||||| ||| || || | | ||| Sbjct 19206 CGAAGGCGGAGAACAAGGTGAAGAGTAGACTCTTTCTGGATATTGTAATCCGAAAGAGTA 19147 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGAT 204843 | ||||| || ||||||||||| ||||| || Sbjct 19146 CGGCCATCCTCAAGCTGCTTTCCAGCGAAAAT 19115 >seq1447 Length=6688 Score = 87.8 bits (96), Expect = 4e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 |||||||| || ||||| ||||| || ||| || | || || ||||| || ||| Sbjct 2325 AAGATTCAGGATAAAGAGGGAATCCCTCCTGACCAGCAGCGTCTGATTTTCGCTGGCAAG 2266 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | ||||| || | ||| | | || |||||| ||||||| ||||||||||||||| Sbjct 2265 CAGCTTGAAGACGGCCGTACTCTTTCAGACTACAACATCCAGAAGGAGTCTACTCTTCAC 2206 Query 206374 CTTGTT 206379 |||||| Sbjct 2205 CTTGTT 2200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181739668740718