Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq624 132 5e-26 seq1370 86.0 6e-12 >seq624 Length=13322 Score = 132 bits (146), Expect = 5e-26 Identities = 345/520 (66%), Gaps = 11/520 (2%) Strand=Plus/Minus Query 46758 GTGCCATGCGTTCGCAAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGC- 46816 || || ||| |||||||||||||| | ||||| | ||||||||| | || || | Sbjct 7884 GTACCTTGCATTCGCAAAAAGGCCGACTGGGCACTCAAGTGGATCTCG---GATACGGAA 7828 Query 46817 -CACGCTG-GCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGC 46874 || ||| | | ||| | || ||||| || ||||| || | ||||| || || Sbjct 7827 TCAAGCTTTGGAGTGCGGCTTGTTGCATTTGCTGCTGTCGAGGGTATCTTTTTCTCAGGA 7768 Query 46875 AGTTTTGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGT 46934 ||||| ||||| |||| | || | || | ||||| |||||||| ||| | Sbjct 7767 TCCTTTGCAGCCATCTTTTGGCTCAAGAAACGTGGTCTTATGCCCGGCCTGACATTCTCT 7708 Query 46935 AACGAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCTCTATTACAAG 46994 ||||||||||| || || || || || || || || |||||||| ||||| | | || Sbjct 7707 AACGAGTTGATTTCACGTGATGAGGGTCTTCATACCGACTTTGCTTGTCTATTGTTCACA 7648 Query 46995 ACGCGCGTGAATGAGAAATTAAACTCGGACACGATCCTGAGCATGTTTAGGGAGGCGGTG 47054 | | |||| || | | |||||| | || | | || | ||||| || Sbjct 7647 CTCCTCAAGAATAAGCCAGCAGACTCGGTTGTGCACCAAATCTTG---ACCGAGGCAGTT 7591 Query 47055 AGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCA 47114 || ||| ||||||| | || | |||||| || || || || | |||||||| || Sbjct 7590 GCTATTGAACAGGAGTTCCTGACCGAGGCGCTCCCAGTTGCACTGATTGGCATGAATGC- 7532 Query 47115 CAGTCT-ATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACA 47173 || ||| ||| ||||||||||||||| || || ||||| || || | ||||| | Sbjct 7531 CAATCTCATGAAGAGATATATTGAGTTTGTTGCTGACCGTCTCTTTTTGGAACTCGGGCT 7472 Query 47174 ACCGAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGG 47233 || ||| | | | ||||| ||||| || ||| | | || || || | || Sbjct 7471 CCCCAAAGCATACGGCGTTGAGAATCCATTTGATTTCATGGAAATTATCTCTCTGCAAGG 7412 Query 47234 CAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTATAAG 47273 ||||||||| ||||| || || |||||||| |||||| || Sbjct 7411 CAAAACCAACTTTTTTGAAAAGCGAGTCGGCGAGTATCAG 7372 >seq1370 Length=7093 Score = 86.0 bits (94), Expect = 6e-12 Identities = 175/257 (68%), Gaps = 6/257 (2%) Strand=Plus/Minus Query 148144 AGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTC 148203 ||||| ||||| | ||||||| ||| | || || || || || ||||| Sbjct 5670 AGCAAGAAACAACTAGACATTTGTGGATGAGGGGTACCAGCATTAAAGAGCGTGGGTGAT 5611 Query 148204 GCGTGCGTAAACAATTTTTGACTCATCATGCGAT---ACGTCTCAATAGCGTCTTCGATG 148260 ||||| || || || |||| | | |||| ||| | |||||||| || |||||| | Sbjct 5610 GCGTGGGTGAAAAACTTTT--CGGA-CATGAGATTGTAAGTCTCAATGGCAGCTTCGACG 5554 Query 148261 TCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCGGCAACT 148320 || || ||||||||||| | ||||| ||||| ||||||||||| || || || ||| | Sbjct 5553 TCATCACCGTGAATGCCAACAGCGACACGCATCAGCATGTGCTGAGGACGCTCAGCAGTT 5494 Query 148321 TGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGTACTTGTAA 148380 | |||||| || ||||| || || || ||| | |||||||| ||||| Sbjct 5493 TTGCGGTTGATGCGCAGCAGATAAGAGCGCTCAAGAGTCTTGAAGCCAAAGTAGTTGTAG 5434 Query 148381 TCAAAATCTAGCTCGTA 148397 | |||||| | || || Sbjct 5433 TTGAAATCTCGGTCATA 5417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476579278964880