Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq624 95.1 2e-13 seq5357 86.0 9e-11 >seq624 Length=13322 Score = 95.1 bits (104), Expect = 2e-13 Identities = 118/155 (76%), Gaps = 5/155 (3%) Strand=Plus/Minus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 ||||||||||||||||| | ||||||||| | | || || | ||||| | || Sbjct 7869 AAAAAGGCCGACTGGGCACTCAAGTGGATCTCGGAT-ACGGAATCAAG-CTTTGGAGTGC 7812 Query 1456183 GGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATC 1456240 |||| || | ||||| || |||||||| ||||||||||| || || ||| |||||| Sbjct 7811 GGCTTGTTGCATTTGCTGCTGTCGAGGGTATCTTTTTCTCAGGATCCTT-TGCAGCCATC 7753 Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||||||||||| || || || |||||||| || Sbjct 7752 TTTTGGCTCAAGAAACGTGGTCTTATGCCCGGCCT 7718 >seq5357 Length=1003 Score = 86.0 bits (94), Expect = 9e-11 Identities = 82/104 (79%), Gaps = 6/104 (6%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| ||| ||||||||||||||||||||||||||||| || | | || Sbjct 122 TACTCTACCTACATCTACAAGGTGCTCAAGCAGGTGCACCCTGACACTGGT-----ATT- 69 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACAT 725002 ||||||||| ||||||| ||||||||||| ||||| || ||||| Sbjct 68 TCCAACAAGGCCATGTCCATCATGAACTCCTTTGTTAATGACAT 25 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177294411051996