Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq624 131 1e-25 seq691 84.2 2e-11 >seq624 Length=13322 Score = 131 bits (144), Expect = 1e-25 Identities = 308/457 (67%), Gaps = 11/457 (2%) Strand=Plus/Minus Query 44120 TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTT 44179 ||||||| || ||||| || ||||| | ||| || || || || || |||||||| ||| Sbjct 7821 TTTGGAGTGCGGCTTGTTGCATTTGCTGCTGTCGAGGGTATCTTTTTCTCAGGATCCTTT 7762 Query 44180 GCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAG 44239 || ||||| |||||| | |||||||| ||| | ||||| || |||| || || || ||| Sbjct 7761 GCAGCCATCTTTTGGCTCAAGAAACGTGGTCTTATGCCCGGCCTGACATTCTCTAACGAG 7702 Query 44240 TTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATATCTA 44299 || || |||||||| || | ||| ||| |||||||| | || | | || Sbjct 7701 TTGATTTCACGTGATGAGGGTCTTCATACCGACTTTGCTTGTCTATTGTTCACACTCCTC 7642 Query 44300 GGAGACGATAAGCCTTCATGTAAGACAATTA--CAGATATTGTTGTA-GAGGCAGTAAAG 44356 ||| ||||||| || | | || || | | ||| |||||||| Sbjct 7641 A-AGA--ATAAGCCAGCAG---ACTCGGTTGTGCACCAAATCTTGACCGAGGCAGTTGCT 7588 Query 44357 ATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAATGAACTT 44416 || ||||| || || |||| || | || || | || || ||||||| | Sbjct 7587 ATTGAACAGGAGTTCCTGACCGAGGCGCTCCCAGTTGCACTGATTGGCATGAATGCCAAT 7528 Query 44417 TTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACT-GGGTTGCGA 44475 | ||||| ||||||||| | |||| || ||| | |||||||||| ||| | | Sbjct 7527 CTCATGAAGAGATATATTGAGTTTGTTGCTGACCGTCTCTTTTTGGAACTCGGGCTCCCC 7468 Query 44476 TAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAA 44535 || || || || | || || |||||||| ||||||| ||| || || ||||||| Sbjct 7467 AAAGCA-TACGGCGTTGAGAATCCATTTGATTTCATGGAAATTATCTCTCTGCAAGGCAA 7409 Query 44536 AACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAG 44572 ||| |||||||||||||| || || || || |||||| Sbjct 7408 AACCAACTTTTTTGAAAAGCGAGTCGGCGAGTATCAG 7372 >seq691 Length=12334 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/168 (72%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 41103 CTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATA 41162 || ||||| || ||||||| ||||| |||| ||||||||||| || || |||||||| Sbjct 1076 CTCTCATGCCAGCTGTATCAGAGATCGTGTGATATGGGACTAGGAGTACCTTTTAACATT 1135 Query 41163 GCGAGTTATGCTCTGCTCACGTAT-ATGATTGCACACGTTACCAATTTAAAACCTGGTGA 41221 || || || || || ||||| ||| ||| | || || || || | |||||||| Sbjct 1136 GCTAGCTACGCACTTCTCAC-TATAATGTTGGCGCATGTATGTGGATTCCAGCCTGGTGA 1194 Query 41222 ATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGA 41269 |||||| ||| || ||||||| ||| | || |||||||||| Sbjct 1195 ATTTGTGCACTGTTTGGGAGATGCGCATGTGTATTGCGATCACATAGA 1242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397430045874790