Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3174 84.2 2e-11 >seq3174 Length=2562 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| ||||| || || || ||||| |||||| | || || ||||| || || | || Sbjct 1675 ATGCAAATATTCGTCAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTAGAGTCTTCT 1734 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| || ||||||||||| ||||| || ||||| || || Sbjct 1735 GATACTATTGACAATGTCAAGGCCAAGATTCAAGACAAGGAAGGAATCCCACCTGACCAG 1794 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143 |||||| | || | || || || ||| | || ||| Sbjct 1795 CAGCGTCTCATCTTTGCTGGAAAGCAACTCGAGGAC 1830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434889271340160