Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq274 89.7 4e-13 >seq274 Length=20666 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 |||||| || ||||| ||||| | ||| || || | || |||||||| || || || || Sbjct 19177 CTCTTTCTGGATATTGTAATCCGAAAGAGTACGGCCATCCTCAAGCTGCTTTCCAGCGAA 19118 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || | |||||||||||| | ||| | | |||||| || ||| || |||| | Sbjct 19117 AATCAAACGCTGCTGGTCAGGGGGGATTCCCTCTTTATCTTGGATCTTGGCCTTGACATT 19058 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | || ||| ||||| || |||| ||||| | || ||||| || || || || Sbjct 19057 ATCAATGGTGTCGGATGACTCGACTTCCAAGGTGATTGTCTTACCCGTAAGGGTCTTGAC 18998 Query 39273 AAAGATTTGCAT 39284 |||||||||||| Sbjct 18997 AAAGATTTGCAT 18986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429517550403854