Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq274 134 3e-26 seq3174 95.1 3e-14 >seq274 Length=20666 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || |||||||| ||||| || ||||| |||| ||||||||| | | ||| Sbjct 19207 ACGAAGGCGGAGAACAAGGTGAAGAGTAGACTCTTTCTGGATATTGTAATCCGAAAGAGT 19148 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| |||||||| || | || || ||||| || || || || Sbjct 19147 ACGGCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCAGGGGGGATTCC 19088 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || || ||||||||||| ||| ||| || |||||||| || | || || || || Sbjct 19087 CTCTTTATCTTGGATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCGACTTCCAA 19028 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| ||||| | || || | || | |||||| Sbjct 19027 GGTGATTGTCTTACCCGTAAGGGTCTTGACAAAGATTTGCAT 18986 >seq3174 Length=2562 Score = 95.1 bits (104), Expect = 3e-14 Identities = 118/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || || || || ||||| ||||| ||||| || || || ||||| || || || |||||| Sbjct 1832 CCGTCCTCGAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGTGGGATTCCTTCC 1773 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 |||||||| ||||| ||| ||| || || || || || | || || || | ||| Sbjct 1772 TTGTCTTGAATCTTGGCCTTGACATTGTCAATAGTATCAGAAGACTCTACCTCAAGGGTG 1713 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTA 225717 || |||||||| |||| || || | ||| | ||||||| || Sbjct 1712 ATGGTCTTGCCAGTCAGGGTCTTGACGAATATTTGCATTGTA 1671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192449333478452