Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq624 93.3 4e-14 >seq624 Length=13322 Score = 93.3 bits (102), Expect = 4e-14 Identities = 176/258 (68%), Gaps = 11/258 (4%) Strand=Plus/Plus Query 4842 TACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCT 4901 ||||| ||| || || ||||| || ||||| || ||||| || | | |||||| Sbjct 8114 TACATCTCACTGTGGATGTTTTCAATCATGATCTGGAAGCCGTAGAAATAGCGAGCTTCG 8173 Query 4902 GTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTG 4961 | |||||| || | | |||||| || || | || || || || || || ||| | Sbjct 8174 AAAATTTGAACATCTTGAGAAAATCGCTCAACAAGATTCTCATTAACAATGCCATCAGAG 8233 Query 4962 GCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TTT 5018 || || ||||| ||||| ||| |||| |||||||| |||| ||| |||| | | Sbjct 8234 GCAGCGAAAAAGGCCAACACACGAGAAATAAAGTAGCGTTCATCATCAGTAAGACGCTCT 8293 Query 5019 TTCCAGTGGGGCAAA----TCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGC 5074 | ||||| ||| ||||| | | || ||||| || ||||||| || || || Sbjct 8294 TCCCAGT----CAATGGTGTCTTTTGAAAGGTCTACTTCCTCGGCAGTCCAGAAAGAAGC 8349 Query 5075 TTCCGCTTTTTTGTACAT 5092 ||| |||||||||||||| Sbjct 8350 TTCTGCTTTTTTGTACAT 8367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427021713394214