Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq274 102 6e-17 >seq274 Length=20666 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || ||| || ||||| |||||||| | || || | || || Sbjct 19194 ACAAGGTGAAGAGTAGACTCTTTCTGGATATTGTAATCCGAAAGAGTACGGCCATCCTCA 19135 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || |||||||||||||| || | || | || || || || Sbjct 19134 AGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCAGGGGGGATTCCCTCTTTATCTTGG 19075 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||||| || || || |||| || || ||||| Sbjct 19074 ATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCGACTTCCAAGGTGATTGTCTTA 19015 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| |||||||| || ||||||||||| Sbjct 19014 CCCGTAAGGGTCTTGACAAAGATTTGCAT 18986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359966892401886