Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq16 145 8e-30 >seq16 Length=823159 Score = 145 bits (160), Expect = 8e-30 Identities = 560/869 (64%), Gaps = 13/869 (1%) Strand=Plus/Plus Query 15914 TGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCC 15973 ||||| || ||| ||||||||||| ||||| || || || | | || || | ||| Sbjct 376796 TGGTAGTCGGAAACACGTTTTTCGAAAAAGTTGGTCTTGCCTTGCATTGAAATCATGTCC 376855 Query 15974 ATAAAATCAAAGGGATTAGT--AGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTA 16031 ||||| ||||| ||||| || || | | | || ||| | ||||| | | | | Sbjct 376856 ATAAAGTCAAATGGATTCTGCGAGTTGTAG-TGT-TTGGAGAATCCCAGAGCTATGAGCA 376913 Query 16032 ATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTC 16091 |||||| || ||||| || || ||||| ||||| | | | || ||||| || || Sbjct 376914 GTCTATCGGCAACAAACTCAATGTATTGGCACATCAGTGCACTGTTCATTCCGATCAGCG 376973 Query 16092 GTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATAT 16151 ||| || | | | ||| || || | |||||| || ||||| || || | || Sbjct 376974 ATACTGGCAACGACTCTGTCAAGAACTTTTGTTCAATGACAACAGCCTCAAGCACAATGC 377033 Query 16152 CGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGT 16211 | || | | ||||| || | | | | || || | || | ||||| || |||| Sbjct 377034 CCCTGACCTTGGCCTCAGAAGGCTTGTTGCTGAGATGGCTGAATAGCAGACAGGCAAAGT 377093 Query 16212 CGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTT 16271 | |||| ||||| || | || ||||| || ||||| || || | |||||||| Sbjct 377094 CTGTGTGTAACCCTTCATCGCGGCAAATAAGCTCATTGGAGAATGTAAGTCCTGGCATCA 377153 Query 16272 TTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAA 16331 |||| || || | |||||| || || ||||| || || |||||||| |||||||||| Sbjct 377154 GCCCTCTCTTTTTGAGCCAGAAAATTGCTGCAAACGATCCTGAAAAGAAAATACCCTCAA 377213 Query 16332 CAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCT 16391 | |||||| || || || || | | | || || | | | |||||| ||| Sbjct 377214 CTACTGCAAACGCCGCCAAACGCTCACCAAATGGTGCCTCATCGTCATCAATCCACTTCA 377273 Query 16392 GTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACA---ATT 16448 | |||| | || |||| | || || || | || || || ||||||| | Sbjct 377274 GGGCCCACTTTGCCTTTTCTCCAATGCACGGAATGTTGTCAATTGCGTTAAACAGGTGGT 377333 Query 16449 TCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGT 16508 ||| | | ||| || | || || || || || | ||| | ||||||||| || Sbjct 377334 TCTTCTCTGCCT-CATCTTGA--ATGTATGTGTCCAGCAGCAGTGAGTACATTTCGCTGT 377390 Query 16509 GTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTT 16568 | |||||||| || || || || |||||||| |||| ||||| | || ||||| | Sbjct 377391 GAATGTTCTCAATCATGATTTGGAACCCATAGAAACATCTTGCCTCTGGAATCTGTACCT 377450 Query 16569 CCACG-TAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAAC 16627 | | |||| | | | | ||||||| ||||| || || || || |||||||| || Sbjct 377451 CATTGCTAAAGTTGCT-CACCAGGTTTTCATTGACAATTCCATCCGAGGCAGCAAAGAAT 377509 Query 16628 GCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAA 16687 || | |||| ||| || || || |||| || ||| | | ||| | | || Sbjct 377510 GCTAGGATGTTCTTGATAAAGTAACGCTCGTGTTCTGAAAGCTTTTCCCAGTGTATTTTG 377569 Query 16688 TCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATT 16747 || | || | |||||| || || | |||| || || | |||||||| ||||| Sbjct 377570 TCATGTGAGAGATCCACCTCCTCAGCGTTCCAGAAAGACGCTTCCGCCTTTTTGTACATA 377629 Query 16748 TTCCAAATATCATTGTA-TTGTATGGGAA 16775 ||||| | |||| ||| ||| |||||| Sbjct 377630 TTCCACACCTCATGGTACTTGATTGGGAA 377658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511413939727040