Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq16 93.3 3e-14 >seq16 Length=823159 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 20221 GATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATG 20280 ||||| || ||||||||||||||||| ||||| |||||||| || || || |||||| Sbjct 32063 GATTTAGGGCCTGTGTATGGATTTCAGTGGAGGCATTTTGGCGCAGAGTACGTTGACTGT 32004 Query 20281 AACACAAATTATTTTGGACAAGGAGTA-GATCA-ATTACAAAATGTTATTAATTTAATTA 20338 |||| |||| ||| |||| || ||||| || ||||| || || | || | Sbjct 32003 GACACTGATTACACCGGA-AAGGGCTATGATCAGCTTGCAAAA-GTGATACAGCAGATCA 31946 Query 20339 AAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTT 20398 ||| || || | ||||||||||| ||| | | ||| ||||| || |||| || | Sbjct 31945 GAACTAATCCCTATGACAGAAGAATGATTGTTTCCGCGTGGAATCCTGCAGATTTGTCAA 31886 Query 20399 TAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447 |||||| ||||||| || || ||| | ||| || || || |||| Sbjct 31885 AGATGGCTCTGCCTCCGTGCCACATGTTTGCCCAGTTCTATGTCTCTAA 31837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183649716040