Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq7 82.4 7e-11 >seq7 Length=1083452 Score = 82.4 bits (90), Expect = 7e-11 Identities = 186/280 (66%), Gaps = 0/280 (0%) Strand=Plus/Minus Query 38092 TTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGAC 38151 ||||| | || || | ||| || || || || ||||||||||| || | || |||| Sbjct 948800 TTCTTGCGCAAACTCAAAAACTCAAAGATGTCCGCGTGCCATGGCTCCAGGTATATCGCA 948741 Query 38152 ATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATT 38211 | ||| ||||| || |||| ||||| || | | ||| || |||| | || ||| | Sbjct 948740 AATGCCCCTGGCCTCTTATTTCCTCCTTGGTCCACATACCTTGCTGTATGGTTGAATACT 948681 Query 38212 CTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTA 38271 | | ||| || ||||| ||||| ||| | ||||| | || | ||| || | | | Sbjct 948680 CGGAGCATTGGCACTATCCCATTCGATGTCCCGTTCGTTCCTGCTATGTACGAGTCTGTT 948621 Query 38272 GCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCAT 38331 || | || ||| | || || ||||| ||||| |||||||| | || ||| Sbjct 948620 GCCCTGATGTTATGCACACTCAGACCAATTCCTCCTGCTGACTTTGATATCATCGCACAT 948561 Query 38332 TGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCT 38371 || || | ||||| | || ||||| ||| |||||||| Sbjct 948560 TGCTTCAGTGTATCGTAAATCCCTTCAATAGAGTCATCCT 948521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524378327680