Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq56 86.0 6e-12 >seq56 Length=671324 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| | || || |||| || ||||| ||||| |||||||| ||| | Sbjct 567835 CCACCACGGAGACGGAGTACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 567776 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || | || || ||||| ||||| ||| | |||| |||||||||||| || || Sbjct 567775 AAGGTACGGCCATCCTCAAGTTGCTTACCGGCAAAAATCAAACGTTGCTGATCTGGGGGA 567716 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| || || || |||||||| | | || | || || | | ||| || Sbjct 567715 ATTCCTTCCTTATCCTGGATCTTTTGTTTAACGTTATCGATGGTATCTGAAGATTCCACC 567656 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | ||||| || || | ||| ||||| || || ||||| Sbjct 567655 TCGAGGGTGATGGTCTTCCCAGTTAGTGTCTTTACAAAAATCTGCAT 567609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507013943687040