Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq16 111 1e-19 seq56 98.7 9e-16 >seq16 Length=823159 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||| || | ||||| |||||||| | ||| || || || ||| | |||||| Sbjct 229161 ACCAAATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGACAAGGTGCGGCCATCCTCA 229220 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || |||||||| |||| || || | ||| || ||||| || || || || || || | | Sbjct 229221 AGTTGTTTTCCAGCAAAAATCAAACGTTGTTGGTCTGGTGGGATCCCCTCCTTATCCTGA 229280 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || ||| ||||||| | ||| ||||| | | || || |||| || || ||||| Sbjct 229281 ATCTTTTGCTTGACGTTGTCGATTGTGTCTGAGGACTCAACCTCAAGGGTAATTGTTTTA 229340 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || ||||| |||||||||||||| Sbjct 229341 CCAGTCAGCGTTTTGACAAAGATCTGCAT 229369 >seq56 Length=671324 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| ||||||||||| | ||| || ||| || || | |||||| Sbjct 567817 ACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTACGGCCATCCTCA 567758 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || || || ||| |||| || || | |||||||||||| ||||| ||||| || || | Sbjct 567757 AGTTGCTTACCGGCAAAAATCAAACGTTGCTGATCTGGGGGAATTCCTTCCTTATCCTGG 567698 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || ||| || ||| ||| || || | || || || | |||||||| || Sbjct 567697 ATCTTTTGTTTAACGTTATCGATGGTATCTGAAGATTCCACCTCGAGGGTGATGGTCTTC 567638 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 ||||| || || || ||||| |||||||| || Sbjct 567637 CCAGTTAGTGTCTTTACAAAAATCTGCATTCT 567606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290796537920