Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq45 188 1e-43 seq22 179 6e-41 >seq45 Length=790207 Score = 188 bits (208), Expect = 1e-43 Identities = 204/268 (76%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| ||| || |||||||||||||| ||||||||||||||||| Sbjct 512783 GCCAAGCGTCACAGAAAGAT-TCTACGTGATAACATCCAAGGTATCACCAAGCCAGCTAT 512725 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | ||||| |||||||||||||| ||||||||| |||||||| | | || ||||| | Sbjct 512724 CAGACGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGGACTCATTTACGAAGAAAC 512665 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| |||| | ||| | ||||| | | ||| ||| || ||| || || ||||| Sbjct 512664 CCGTGGTGTTCTTAAGGTATTCCTGGAAAACGTAATCAGAGACGCTGTCACATACACCGA 512605 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| ||||||||||| ||||| || |||||| | || || || ||||| | ||||| Sbjct 512604 ACACGCCAAACGTAAGACAGTCACATCAATGGATGTTGTATACGCTTTGAAGAGACAAGG 512545 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | || ||||| ||| | ||| Sbjct 512544 ACGCACCTTGTACGGTTTCGGAGGATAA 512517 >seq22 Length=346663 Score = 179 bits (198), Expect = 6e-41 Identities = 200/262 (76%), Gaps = 4/262 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| ||| || |||||||||||||| || |||||||||||||| Sbjct 112387 GCCAAGCGTCACAGAAAGAT-TCTACGTGATAACATCCAAGGTATTACCAAGCCAGCTAT 112445 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | ||||| |||||||||||||| ||||||||| |||| ||| | |||||||||| | Sbjct 112446 CAGACGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATCTCAGGACTCATCTATGAAGAAAC 112505 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCG 16610 |||| |||| | ||| | ||| | | | ||| ||| || ||| || || || || | Sbjct 112506 CCGTGGTGTTCTCAAGGTATTCTTGGAAAACGTAATCAGAGACGCTGTTACA-TACACAG 112564 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 | ||||| |||||||| || ||||| || |||||| | || ||||| || || | |||| Sbjct 112565 AACACGCCAAACGTAAAACAGTCACATCAATGGATGTTGTATATGCTTTAAAGAGACAAG 112624 Query 16671 GCCGTAAGATTTATGGTTTTGG 16692 | |||| | ||||| ||||| Sbjct 112625 GACGTACATTGTATGGATTTGG 112646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075134169896