Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq16 179 5e-40 >seq16 Length=823159 Score = 179 bits (198), Expect = 5e-40 Identities = 575/880 (65%), Gaps = 13/880 (1%) Strand=Plus/Plus Query 33028 ACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAAC 33087 ||||||||||||||||| || || || |||| || ||| || | ||||| || ||||| Sbjct 376808 ACACGTTTTTCGAAAAAGTTGGTCTTGCCTTGCATTGAAATCATGTCCATAAAGTCAAAT 376867 Query 33088 GGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACG 33147 ||||| || || ||| ||||||| | | || |||||| || || Sbjct 376868 GGATTCTGCGAGTTGTAGTGTTTGGAGAATCCCAGAGCTATGAGCAGTCTATCGGCAACA 376927 Query 33148 AATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCC 33207 || || || ||| ||||| | ||| |||||||| || || ||||| | | | Sbjct 376928 AACTCAATGTATTGGCACATCAGTGCACTGTTCATTCCGATCAGCGATACTGGCAACGAC 376987 Query 33208 GCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTC 33266 | || ||||| || |||||||||| || || || | ||| || || | | Sbjct 376988 TCTGTCAAGAACTT-TTGTTCAATGACAACAGCCTCAAGCACAATGCCCCTGACCTTGGC 377046 Query 33267 TTCACTCGG-TGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGAC 33325 ||| || | | ||| | ||| | || | || ||| || || || ||| | | Sbjct 377047 CTCAGAAGGCTTGTTGCTG-AGATGGCTGAATAGCAGACAGGCAAAGTCTGTGTGTAACC 377105 Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 | || || | | ||| || || ||||| || || ||||| ||||| || || | ||||| Sbjct 377106 CTTCATCGCGGCAAATAAGCTCATTGGAGAATGTAAGTCCTGGCATCAGCCCTCTCTTTT 377165 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| || || | || || ||||| |||||||| || || || ||| | ||||| | Sbjct 377166 TGAGCCAGAAAATTGCTGCAAACGATCCTGAAAAGAAAATACCCTCAACTACTGCAAACG 377225 Query 33446 CAATAAGTCTCTCTCCATAACCGGCGCT----GTCATGTATCCACTTTTGAGCCCAATCG 33501 | | | ||| ||| | || || ||||| |||||||| | ||||| | Sbjct 377226 CCGCCAAACGCTCACCAAATGGTGC-CTCATCGTCATCAATCCACTTCAGGGCCCACTTT 377284 Query 33502 GCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTA 33561 ||||| | | | || || || | || || || ||||| || | ||| || || | Sbjct 377285 GCCTTTTCTCCAATGCACGGAATGTTGTCAATTGCGTTAAACAGGTGGTTCTTCTC-TGC 377343 Query 33562 CT-ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAAT 33620 || ||||| || || || || | || || |||||||| |||||||| ||||| Sbjct 377344 CTCATCTTGAATGTATGTGTCCAGCAGCAGTGAGTACATTTCGCTGTGAATGTTCTCAAT 377403 Query 33621 GGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTAC-AAAATC 33679 || || || || ||||||||||| ||||| | ||||||||| || | | ||| | Sbjct 377404 CATGATTTGGAACCCATAGAAACATCTTGCCTCTGGAATCTGTACCTCATTGCTAAAGTT 377463 Query 33680 GTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTT 33739 | | | ||| |||||||| || ||||| || ||| ||||| || || | | | | Sbjct 377464 GCT-CACCAGGTTTTCATTGACAATTCCATCCGAGGCAGCAAAGAATGCTAGGATGTTCT 377522 Query 33740 TTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATAT 33799 | ||||| || |||| | || || || | ||| | | | || | || | || Sbjct 377523 TGATAAAGTAACGCTCGTGTTCTGAAAGCTTTTCCCAGTGTATTTTGTCATGTGAGAGAT 377582 Query 33800 CTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCAT 33859 | || || || | |||| || || || || |||||||| ||||| ||||| | |||| Sbjct 377583 CCACCTCCTCAGCGTTCCAGAAAGACGCTTCCGCCTTTTTGTACATATTCCACACCTCAT 377642 Query 33860 AATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGG 33899 || | ||||||||| | |||||||| |||| ||||| Sbjct 377643 GGTACTTGATTGGGAACAGCACAAATCTGCTTGGGTTTGG 377682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946639347520