Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq7 271 2e-67 seq16 179 1e-39 >seq7 Length=1083452 Score = 271 bits (300), Expect = 2e-67 Identities = 511/740 (69%), Gaps = 15/740 (2%) Strand=Plus/Plus Query 363591 TCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTT 363650 ||| ||| |||| || |||||| | || | ||| |||| || || || || || || | Sbjct 948486 TCCGCAGTTGTCGTCGTGCTTTTTGCTGACGATGCAGGATGACTCTATTGAAGGGATTTA 948545 Query 363651 TGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGAT 363710 || ||||| ||| | ||||| | || || ||| ||||| ||||||||| | | Sbjct 948546 CGATACACTGAAGCAATGTGCGATGATATCAAAGTCAGCAGGAGGAATTGGTCTGAGTGT 948605 Query 363711 CCACAATGTTCGTGCA-CAGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGG 363768 || || | | ||| |||| || |||| || || | |||| | ||||||||| Sbjct 948606 GCATAACATCAGGGCAACAGACTCGT-ACATAGCAGGAACGAACGGGACA-TCGAATGGG 948663 Query 363769 CTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGA 363828 | || || ||||| || || || || |||| || ||||| || ||||| || ||| Sbjct 948664 ATAGTGCCAATGCTCCGAGTATTCAACCATACAGCAAGGTATGTGGACCAAGGAGGAAAT 948723 Query 363829 AAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTT 363888 ||| | |||||| ||||| || || || ||||| || || || || ||||||||| Sbjct 948724 AAGAGGCCAGGGGCATTTGCGATATACCTGGAGCCATGGCACGCGGACATCTTTGAGTTT 948783 Query 363889 CTTGAGCTC-CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGC 363947 ||||| | || || ||| ||||| ||||| | |||||||| |||| |||| Sbjct 948784 -TTGAGTTTGCGCAAGAACCACGGAAAGGAGGAGAACAGGGCACGTGACTTGTTTTATGG 948842 Query 363948 ACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTT 364007 | | ||| || | || ||||||||||| ||| || || | | ||| | || Sbjct 948843 AATGTGGATTCCGGATTTGTTTATGAAGCGGGTGCTGGACAATAGGGACTGGAGTTTGTT 948902 Query 364008 TTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATA 364067 ||||||||||| ||| ||| ||| || ||||| || || | || || | || Sbjct 948903 CTGCCCACACGAGGCGCCAAATCTACACGAGGTTTGGGGAGAGGAGTTTGAGGCATTGTA 948962 Query 364068 CGAAAAGTATGAAT---CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATG 364124 | |||||| || | ||||| ||| | |||| |||| |||||| |||| || Sbjct 948963 CACAAAGTACGAGAACACAGAGGGGCTGGCAAGAAAGAAGGTTCCAGCACAGCAGCTGTG 949022 Query 364125 GTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTC 364184 || || || |||| ||||||||||| ||||||||||| || ||| ||||||||||| | Sbjct 949023 GTACGCGATTCTGGACTCGCAGATTGAAACAGGAACACCGTACATGCTGTACAAAGATGC 949082 Query 364185 GTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAG---CAACCTATG 364241 |||||| ||||||| ||||||||| |||| ||||||| ||| |||| ||| | || Sbjct 949083 GTGCAATGGCAAGTCAAACCAGCAGAACCTGGGTACAA-TCA--AGAGCTCCAATTTGTG 949139 Query 364242 TACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGAT 364301 ||| |||||| | || ||||| | ||||||| || || || ||| | ||||| || Sbjct 949140 TACAGAGATTGTCGAGTACACGTCAAACGACGAGGTGGCGGTTTGCAACTTGGCGTCAAT 949199 Query 364302 CGCGCTTCCGGCGTTTGTAA 364321 || || || |||||||||| Sbjct 949200 TGCACTGCCAGCGTTTGTAA 949219 >seq16 Length=823159 Score = 179 bits (198), Expect = 1e-39 Identities = 524/786 (67%), Gaps = 22/786 (3%) Strand=Plus/Minus Query 22176 AAAACTTACAGAAAACGAACAACATTTTATCAAATATATTCTAGCATTCTTTGCTACCGC 22235 ||| ||| ||||| |||| | | |||||||| | || ||||||||||||||| || | Sbjct 377554 AAAGCTTTCAGAACACGAGCGTTACTTTATCAAGAACATCCTAGCATTCTTTGCTGCCTC 377495 Query 22236 AGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTT-GCATCTGAAATTCAATACCCAG 22294 || || || || ||| || || |||| || ||| ||| ||| | || |||| Sbjct 377494 GGATGGAATTGTCAATGAAAACCTGGTGAGCAACTTTAGCAA-TGAGGTACAGATTCCAG 377436 Query 22295 AGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTTCACGCGGAAACATATT 22354 |||| |||||||||||||| | ||||| |||||||| || ||||| |||| || | Sbjct 377435 AGGCAAGATGTTTCTATGGGTTCCAAATCATGATTGAGAACATTCACAGCGAAATGTACT 377376 Query 22355 CTATGATGCTACAGTCACTCGTAGAAGATAA---AGACGAACAACGAAACTTATTCCGCG 22411 | || |||| | || | | ||||| | ||| ||| ||| | | | || || Sbjct 377375 CACTGCTGCTGGACACATACATTCAAGATGAGGCAGA-GAAGAACCA--CCTGTTTAACG 377319 Query 22412 CGATTCGCACCATTCAATCAATTA-AGAATAAGGCAGATTGGGCGCTGAAATGGAT-GA- 22468 | ||| || ||||| | ||| |||| |||||| | ||||| ||||| ||||| || Sbjct 377318 CAATTGACAACATTCCGTGCATTGGAGAA-AAGGCAAAGTGGGCCCTGAAGTGGATTGAT 377260 Query 22469 -ACAATGAACGTTCATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTC 22527 || |||| |||| | || ||| | || ||||| || ||||| || |||||| Sbjct 377259 GACGATGAGGCACCATTTGGTGAGCGTTTGGCGGCGTTTGCAGTAGTTGAGGGTATTTTC 377200 Query 22528 TTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTA 22587 ||||| ||| | ||| ||||| || ||||| ||||| | | | ||||| || || Sbjct 377199 TTTTCAGGATCGTTTGCAGCAATTTTCTGGCTCAAAAAGAGAGGGCTGATGCCAGGACTT 377140 Query 22588 ACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATG 22647 || || || |||||| | ||| |||| ||||| || | || || || ||||| ||| || Sbjct 377139 ACATTCTCCAATGAGCTTATTTGCCGCGATGAAGGGTTACACACAGACTTTGCCTGTCTG 377080 Query 22648 CTATATCGGAATCATATCATTCATAAACTTCCATATGAAACTGTACTTGATATTATTACA 22707 |||| || | ||| ||| | || | | | | | | || | ||| | Sbjct 377079 CTAT-TC--AGCCATCTCAGCAACAAGCCTTCTGAGGCCAAGGTCAGGGGCATTGTGCTT 377023 Query 22708 AATGCAGTTGAACTTGAACGTCTATTTATTTGC-GAGGCGTTACCAGTAAGTCTCATTGG 22766 | || |||| |||||| | || || | ||| |||| |||||| || || || Sbjct 377022 GAGGCTGTTGTCATTGAAC-AAAAGTTCTTGACAGAGTCGTTGCCAGTATCGCTGATCGG 376964 Query 22767 TATCAATGCCGAATCAATGAGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTC 22826 || || | | ||| | ||| ||| | |||||||| ||| | || | || | Sbjct 376963 AATGAACAGTGCACTGATGTGCCAATACATTGAGTTTGTTGCCGATAGACTGCTCATAGC 376904 Query 22827 ACTCGG-TTATGCAAAGCATTATAACGTCG-TTAATCCATTTGAATGGATGGAACTTATT 22884 || || || | |||| || || ||| ||| ||||||||||| | ||||| | ||| Sbjct 376903 TCTGGGATTCTCCAAA-CACTACAAC-TCGCAGAATCCATTTGACTTTATGGACATGATT 376846 Query 22885 TCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGT 22944 ||| | |||| |||||||| || ||||||||| | ||| || ||||| || || ||| Sbjct 376845 TCAATGCAAGGCAAGACCAACTTTTTCGAAAAACGTGTTTCCGACTACCAGAAGGCTGGT 376786 Query 22945 GTTATG 22950 || ||| Sbjct 376785 GTCATG 376780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352397656304