Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq56 118 9e-22 >seq56 Length=671324 Score = 118 bits (130), Expect = 9e-22 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||||||||| | || || || ||||||| |||| ||||| || || Sbjct 567608 AATGCAGATTTTTGTAAAGACACTAACTGGGAAGACCATCACCCTCGAGGTGGAATCTTC 567667 Query 25058 TGACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || || ||||| | || | || ||||| ||| || || ||||| ||||| || || | Sbjct 567668 AGATACCATCGA-TAACGTTAAACAAAAGATCCAGGATAAGGAAGGAATTCCCCCAGATC 567726 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | || || | ||||||||||| || ||| | || |||| || || || ||| |||| Sbjct 567727 AGCAACGTTTGATTTTTGCCGGTAAGCAACTTGAGGATGGCCGTACCTTGTCCGACTACA 567786 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | || ||||| |||||||| || || || || || Sbjct 567787 ACATCCAAAAGGAATCCACTCTTCACTTGGTACT 567820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327619754680