Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq16 199 4e-46 >seq16 Length=823159 Score = 199 bits (220), Expect = 4e-46 Identities = 399/586 (68%), Gaps = 4/586 (1%) Strand=Plus/Plus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || |||||||| || ||||| ||||| || || | || | ||||||| |||||| | Sbjct 377084 CAGGCAAAGTCTGTGTGTAACCCTTCATCGCGGCAAATAAGCTCATTGGAGAATGTAAGT 377143 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 ||||| | ||| |||| || |||||||| || |||| ||||| || ||||| || Sbjct 377144 CCTGGCATCAGCCCTCTCTTTTTGAGCCAGAAAATTGCTGCAAACGATCCTGAAAAGAAA 377203 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG 93271 ||||| || || ||||||| ||| | | ||| || |||| ||| || Sbjct 377204 ATACCCTCAACTACTGCAAACGCCGCCAAACGCTCACCAAATGGTGCCTCATCGTCATCA 377263 Query 93272 ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TCGATAGCGTT 93330 ||||| || | ||||| | || |||| ||| || || | |||| || || ||||| Sbjct 377264 ATCCACTTCAGGGCCCACTTTGCCTTTTCTCCAATGCACGGAA-TGTTGTCAATTGCGTT 377322 Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390 ||| |||| | ||| || |||| | |||||||| || | | ||| || ||||| Sbjct 377323 AAACAGGTGGTTCTTCTCTGCCTCATCTTGAATGTATGTGTCCAGCAGCAGTGAGTACAT 377382 Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450 ||| || | ||||| || |||||||| || ||||||||||| || || | || Sbjct 377383 TTCGCTGTGAATGTTCTCAATCATGATTTGGAACCCATAGAAACATCTTGCCTCTGGAAT 377442 Query 93451 CTGCACTTC-TTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 ||| || || ||| ||| | ||| || || ||||||||||| || ||||| || || | Sbjct 377443 CTGTACCTCATTGCTAAAGTTGCTC-ACCAGGTTTTCATTGACAATTCCATCCGAGGCAG 377501 Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAAT 93569 |||| || || | || | ||| ||||| | ||| | ||| |||||| ||||| | Sbjct 377502 CAAAGAATGCTAGGATGTTCTTGATAAAGTAACGCTCGTGTTCTGAAAGCTTTTCCCAGT 377561 Query 93570 CGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTT 93629 | || | ||| ||||| || || || | |||| || || ||||| || |||| Sbjct 377562 GTATTTTGTCATGTGAGAGATCCACCTCCTCAGCGTTCCAGAAAGACGCTTCCGCCTTTT 377621 Query 93630 TGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 ||||||||| ||| | || || || | ||||| || | ||||| Sbjct 377622 TGTACATATTCCACACCTCATGGTACTTGATTGGGAACAGCACAAA 377667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860298825280