Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq16 214 3e-50 >seq16 Length=823159 Score = 214 bits (236), Expect = 3e-50 Identities = 493/739 (67%), Gaps = 13/739 (2%) Strand=Plus/Minus Query 42412 TCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCA 42471 |||| ||||| || || ||||| || ||||| || || || |||||||| ||||||| | Sbjct 377525 TCAAGAACATCCTAGCATTCTTTGCTGCCTCGGATGGAATTGTCAATGAAAACCTGGTGA 377466 Query 42472 CCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAG 42531 || || | || ||||| ||| ||||| | || ||||| || ||||| || Sbjct 377465 GCAACTTTAGCAATGAGGTACAGATTCCAGAGGCAAGATGTTTCTATGGGTTCCAAATCA 377406 Query 42532 CCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATC 42591 || |||||| | ||| || ||||| | ||||| |||| ||||| | ||| Sbjct 377405 TGATTGAGAACATTCACAGCGAAATGTACTCACTGCTGCTGGACACATACATTCAAGATG 377346 Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCA-AGAAGAAG 42650 | ||| ||| ||||| || || || || | || || ||||| |||| ||| Sbjct 377345 AGGCAGAGAAGAACCACCTGTTTAACGCAATTGACAACATTCCGTGCATTGGAGAA-AAG 377287 Query 42651 GCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTA 42710 || | ||||| || || ||||| || || ||| | || || ||| | ||| Sbjct 377286 GCAAAGTGGGCCCTGAAGTGGATTGATGACGATGAGGCACCATTTGGTGAGCGTTTGGCG 377227 Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770 || ||| | | || ||||| || ||||| || || | || || | || ||||||||| Sbjct 377226 GCGTTTGCAGTAGTTGAGGGTATTTTCTTTTCAGGATCGTTTGCAGCAATTTTCTGGCTC 377167 Query 42771 AAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAG 42830 || ||| | | |||||| ||||| || ||||| || || || || || | || || Sbjct 377166 AAAAAGAGAGGGCTGATGCCAGGACTTACATTCTCCAATGAGCTTATTTGCCGCGATGAA 377107 Query 42831 GGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCG 42890 ||| | || | ||||||||||| || || ||| ||||| ||||| ||||||| || Sbjct 377106 GGGTTACACACAGACTTTGCCTGTCTGCTATTC---AGCCATCTCAGCAACAAGCCTTCT 377050 Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950 ||| |||| ||| ||| | ||||| || | || || | ||||| | || Sbjct 377049 GAGGCCAAGGTCAGGGGCATTGTGCTTGAGGCTGTTGTCATTGAACAAAAGTTCTTGACA 376990 Query 42951 CAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAG 43010 ||||| |||| || || ||| |||| |||||| | || |||||| | ||||| || Sbjct 376989 GAGTCGTTGCCAGTATCGCTGATCGGAATGAACAGTGCACTGATGTGCCAATACATTGAG 376930 Query 43011 TACGTCGCCGACCATCTCCTGTGCCAGA----TGGGTCTCAGCCGCCTCTACAACACGCC 43066 | || ||||| || || || | |||| || | | ||||||| ||| Sbjct 376929 TTTGTTGCCGATAGACTGCT----CATAGCTCTGGGATTCTCCAAACACTACAACTCGCA 376874 Query 43067 GTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAA 43126 | || || ||||||||||| | || || || | |||||||||||||||||||| || Sbjct 376873 GAATCCATTTGACTTTATGGACATGATTTCAATGCAAGGCAAGACCAACTTTTTCGAAAA 376814 Query 43127 GCGCGTCGCCGACTACCAG 43145 || || ||||||||||| Sbjct 376813 ACGTGTTTCCGACTACCAG 376795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338350094720