Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq7 161 1e-34 seq16 125 9e-24 >seq7 Length=1083452 Score = 161 bits (178), Expect = 1e-34 Identities = 522/803 (65%), Gaps = 18/803 (2%) Strand=Plus/Minus Query 114464 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 114523 || || || |||||||||| || || || | ||| || || |||||||| | | Sbjct 949208 GGCAGTGCAATTGACGCCAAGTTGCAAACCGCCACCTCGTCGTTTGACGTGTACTCGACA 949149 Query 114524 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 114583 || || ||||||||||| || ||||| || || |||| ||||| || |||||||| Sbjct 949148 ATCTCTGTACACAAATTGGAGCTCTTGATTGTACCCAGGTTCTGCTGGTTTGACTTGCCA 949089 Query 114584 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 114643 || |||||||| ||||| |||||||| || || || || || | || || | ||||| Sbjct 949088 TTGCACGCATCTTTGTACAGCATGTACGGTGTTCCTGTTTCAATCTGCGAGTCCAGAATC 949029 Query 114644 GCCTTCCAGACATCGGC--GGCTGGCACAGTGGCGTTGGCTCGCCCCTC---CTCCTCGT 114698 || | || ||| | || ||||| || | | || ||||||| | ||||| Sbjct 949028 GCGTACC--ACAGCTGCTGTGCTGGAACCTTCTTTCTTGCCAGCCCCTCTGTGTTCTCGT 948971 Query 114699 ACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTAT 114758 |||||||||| | || |||||||| || ||| |||| || ||| |||| | Sbjct 948970 ACTTTGTGTACAATGCCTCAAACTCCTCTCCCCAAACCTCGTGTAGATTTGGCGCCTCGT 948911 Query 114759 CTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGA 114818 ||||||||| | | ||| | | | ||| || |||||||| || | || || | Sbjct 948910 GTGGGCAGAACAAACTCCAGTCCCTATTGTCCAGCACCCGCTTCATAAACAAATCCGGAA 948851 Query 114819 TCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCT--TCATCCCCCTGATTGAGACG 114876 |||| | | | || | || || || |||| || | || || || || Sbjct 948850 TCCACATTCCATAAAACAAGTCACG--TGCCCTGTTCTCCTCCTTTCCGTGGTTCTTGCG 948793 Query 114877 CAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC 114936 ||| |||||| || | ||| ||||||||||| || |||||||| | ||| | || ||| Sbjct 948792 CAAACTCAAAAACTCAAAGATGTCCGCGTGCCATGGCTCCAGGTATATCGCAAATGCCCC 948733 Query 114937 ---CTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCAT 114993 | | | || | |||| |||||||| ||||| || ||||| || ||||| Sbjct 948732 TGGCCTCTTATTTCCTCCTTGGTCCACATACCTTGCTGTATGGTTGAATACTCGGAGCAT 948673 Query 114994 TGGAATGATACCATCAGATTGGCCATTTGTCCC--CCGAATACGAGACTTATTGGCTCTG 115051 ||| | || |||| ||| || || || || | |||||| || | || ||| Sbjct 948672 TGGCACTATCCCATTCGATGTCCCGTTCGTTCCTGCTATGTACGAGTCT--GTTGCCCTG 948615 Query 115052 ACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTG 115111 | | ||| | || |||||| || ||||| ||||||| || ||| || | | | Sbjct 948614 ATGTTATGCACACTCAGACCAATTCCTCCTGCTGACTTTGATATCATCGCACATTGCTTC 948555 Query 115112 AGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGAC 115171 || | |||| ||||| || || |||||| ||| | | | | ||||| |||| Sbjct 948554 AGTGTATCGTAAATCCCTTCAATAGAGTCATCCTGCATCGTCAGCAAAAAGCACGACGAC 948495 Query 115172 ATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT 115231 | || || | | |||||| | ||| || || ||||||| || || | |||| Sbjct 948494 AACTGCGGACGCGTTGTACCCGAGTTAAACAGCGTTGGTGAGGCATGCGTAAACAGCTTC 948435 Query 115232 TGGGACATCTTATCGTAGGTCTC 115254 || |||||| | | || ||||| Sbjct 948434 TGCGACATCATGTTATACGTCTC 948412 Score = 86.0 bits (94), Expect = 7e-12 Identities = 153/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 113590 CTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCAT 113649 ||| | ||| ||||||||||| || ||||||||||||| ||||||| |||| | |||||| Sbjct 950133 CTTGGTTCGCAGGTAGTACATGCCGGTCTTGAGCCCCTTCTTCCAGCCATAGAAATGCAT 950074 Query 113650 CGAGGACAACTT-GGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGAT 113708 | | || | ||| ||||| | |||||| || ||| | || ||||| | Sbjct 950073 GCTTGTGAGTTTCTGGTAGT-TTGGATTGTCCATGTGGATGTTTAGCGACTGCGATTGGT 950015 Query 113709 CGATG-AAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCAC 113767 | ||| ||||| || || || || | | ||||| ||| |||| |||||| || || Sbjct 950014 CAATGTAAGCG-CCCCGGTCAGCTGATAGGTCAATGACAATCTTCTGCTTGATCTCGTAC 949956 Query 113768 ACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATC 113805 |||||| |||| || | ||| | ||| ||| || || Sbjct 949955 ACAGTTTTGTACAGCTCCTTCAGGTCAGATGGAATTTC 949918 >seq16 Length=823159 Score = 125 bits (138), Expect = 9e-24 Identities = 477/738 (65%), Gaps = 12/738 (2%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATAT--TCTCC 125815 |||||| ||| || || ||||| ||||| ||||| || | || ||| || | ||| Sbjct 376798 GTAGTCGGAAACACGTTTTTCGAAAAAGTTGGTCTTGCCTTGCAT--TGAAATCATGTCC 376855 Query 125816 ATAAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTG-GCACCCCA-ATCTGTTTGAGGA 125873 ||||| |||||||| |||| ||||| | | | | | | |||| | || | ||| | Sbjct 376856 ATAAAGTCAAATGGATTCTGCGAGTTGTAGTGTTTGGAGAATCCCAGAGCTAT--GAGCA 376913 Query 125874 GACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG-G 125932 | | ||| | || |||||||||| | ||||| || |||||| ||||| || | Sbjct 376914 GTCTATCGGCAACAAACTCAATGTATTGGCACATCAGTGCACTGTTCATTCCGATCAGCG 376973 Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992 ||| ||| | || || | |||| | ||||| | || || || |||| ||| Sbjct 376974 ATAC-TGGCAACGACTCTGTCAAGAACTTTTGTTCAATGACAACAGCCTCAAGCACAATG 377032 Query 125993 GCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAAC 126052 | | || || | ||| | |||| | | |||| || |||||| Sbjct 377033 CCCCTGACCTTGGCCTCAGAAGGCTTGTTGCTGAGATGGCTGAATAGCAGACAGGCAAAG 377092 Query 126053 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATG 126112 ||| ||| | || || || ||| | || || ||||| ||||| ||||||||||| Sbjct 377093 TCTGTGTGTAACCCTTCATCGCGGCAAATAAGCTCATTGGAGAATGTAAGTCCTGGCATC 377152 Query 126113 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCC 126172 || || | ||| || | ||||||||| || ||| || || || ||||| || ||||| Sbjct 377153 AGCCCTCTCTTTTTGAGCCAGAAAATTGCTGCAAACGATCCTGAAAAGAAAATACCCTCA 377212 Query 126173 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAACCACTT 126231 || || ||||| | ||||||| |||| | | || | | || |||| |||||| Sbjct 377213 ACTACTGCAAACGCCGCCAAACGCTCACCAAATG-GTGCCTCATCGTCATCAATCCACTT 377271 Query 126232 CATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTC 126291 || ||||||| ||||||| | || ||||| | | | | || || | ||| || | Sbjct 377272 CAGGGCCCACTTTGCCTTTTCTCCAATGCACGGAATGTTGTCAATTGCGTTAAACAGGTG 377331 Query 126292 CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTG 126351 ||||| |||| ||||| ||||| | || | || ||| || |||||| ||| Sbjct 377332 GTTCTTCTCTGCCTCATCTTGAATGTATGTGTCCAGCAGCAGTGAGTACATTTCGCTGTG 377391 Query 126352 GACCATTTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTC 126411 | | ||| | | || || | |||||| | | || || ||||||||||| Sbjct 377392 AATGTTCTCAATCATGATTTGGAACCCATAGAAACATCTTGCCTCTGGAATCTGTACCTC 377451 Query 126412 ATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGC 126471 || | ||| ||| | | || ||| ||||||||||| || ||||||| || || Sbjct 377452 ATTGCTAAAGTTGCTCACCAGGTTTTCATTGACAATTCCATCCGAGGCAGCAAAGAATGC 377511 Query 126472 CAGGATATACTTTATGAA 126489 ||||| | ||| || || Sbjct 377512 TAGGATGTTCTTGATAAA 377529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353062381760