Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq7 145 8e-30 >seq7 Length=1083452 Score = 145 bits (160), Expect = 8e-30 Identities = 590/921 (64%), Gaps = 13/921 (1%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| ||||||||| ||||| || ||||||| ||||||| | | | ||| || || | | Sbjct 948277 TACAATTACTTTGGATTCAAGACACTGGAGAGGTCGTACTTGTTGAGGATAGACGGGAAG 948336 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 | ||| | || || | || | ||| | || | | ||||| || || |||| Sbjct 948337 CCAGCGGAGAGGCCACAGTACTTGATTATGAGAGTTAGCGTTGGGATCCATGGGGACGAT 948396 Query 93838 ATGCCGAATGTT-TTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCCA 93895 || | ||| ||| | | | | | ||| | | ||| || ||| |||| || Sbjct 948397 ATAGAGTCGGTTATTGAGACGTATAACATG-ATGTCGCAGAAGCTGTTTACGCATG-CCT 948454 Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 | || || ||||| ||| |||| || || || ||| |||| ||||| || || ||| Sbjct 948455 CACCAACGCTGTTTAACTCGGGTACAACGCGTCCGCAGTTGTCGTCGTGCTTTTTGCTGA 948514 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 ||| ||| ||||| || || |||| ||| | || ||| | ||||||| || | Sbjct 948515 CGATGCAGGATGACTCTATTGAAGGGATTTACGATACACTGAAGCAATGTGCGATGATAT 948574 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075 |||| | || || ||||| || | ||||| || || | | || | | || |||| Sbjct 948575 CAAAGTCAGCAGGAGGAATTGGTCTGAGTGTGCATAACATCAGGGCAACAGACTCGTACA 948634 Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135 | || || || || || || || || | || || |||||||| || |||||| | Sbjct 948635 TAGCAGGAACGAACGGGACATCGAATGGGATAGTGCCAATGCTCCGAGTATTCAACCATA 948694 Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195 | || | || |||||||| || || | |||| || | || ||| | || || | Sbjct 948695 CAGCAAGGTATGTGGACCAAGGAGGAAATAAGAGGCCAGGGGCATTTGCGATATACCTGG 948754 Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255 |||| |||||||||||| | | || | |||| ||||||||||| || || Sbjct 948755 AGCCATGGCACGCGGACATCTTTGAGTTTTTGAGTTTGCGCAAGAACCACGGAAAGGAGG 948814 Query 94256 TGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCG 94315 | | ||||| | ||| | || || | | ||| | || || | |||||||| || | Sbjct 948815 AGAACAGGGCACGTGACTTGTTTTATGGAATGTGGATTCCGGATTTGTTTATGAAGCGGG 948874 Query 94316 TCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACG 94375 | | | || | ||||||| | || || || | || || || ||| | Sbjct 948875 TGCTGGACAATAGGGACTGGAGTTTGTTCTGCCCACACGAGGCGCCAAATCTACACGAGG 948934 Query 94376 TTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGA-ATCGC--AGGGCAAGGCCA 94432 |||| ||| | ||||| | ||||| | ||||| | | | |||| ||| | Sbjct 948935 TTTGGGGAGAGGAGTTTGAGGCATTGTACACAAAGTACGAGAACACAGAGGGGCTGGCAA 948994 Query 94433 G---GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 | ||||||| || | |||||||| | ||| ||||| ||| | || | Sbjct 948995 GAAAGAAGGTT---CCAGCACAGCAGCTGTGGTACGCGATTCTGGACTCGCAGATTGAAA 949051 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 | || || || ||||| ||| ||| || | ||| | |||||| ||||||||| ||| Sbjct 949052 CAGGAACACCGTACATGCTGTACAAAGATGCGTGCAATGGCAAGTCAAACCAGCAGAACC 949111 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 | || ||||||||||| ||| |||| || |||||||||||||| || || |||| Sbjct 949112 TGGGTACAATCAAGAGCTCCAATTTGTGTACAGAGATTGTCGAGTACACGTCAAACGACG 949171 Query 94610 AGATTGCTGTGTGTAACCTGG 94630 || | || || || ||| ||| Sbjct 949172 AGGTGGCGGTTTGCAACTTGG 949192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722754749120