Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq16 100 2e-16 >seq16 Length=823159 Score = 100 bits (110), Expect = 2e-16 Identities = 153/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAA--TTCTCGCGTCTT 15025 || |||||||||||||| || ||||| |||||||| | | || || | | | || | Sbjct 228705 ACCAAATGAAGGGTAGACTCCTTTTGGATGTTGTAGT--CAGACAAGGTGCGGCCATCCT 228762 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 | | |||||| ||||| | |||||||| |||||||| ||| || || ||||| || Sbjct 228763 CAAGTTGTTTTCCAGCAAAAATCAAACGTTGTTGGTCTGGTGGGATCCCCTCCTTATCCT 228822 Query 15086 AAA--TTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGT 15143 || |||||| || || | || || || || || || || | |||||| || Sbjct 228823 GAATCTTTTGC--TTGACGTTGTCGATTGTGTCTGAGGACTCAACCTCAAGGGTAATTGT 228880 Query 15144 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||||| ||||| ||||| ||||| ||||||||| Sbjct 228881 TTTACCAGTCAGCGTTTTAACAAAGATTTGCATA 228914 Score = 100 bits (110), Expect = 2e-16 Identities = 153/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAA--TTCTCGCGTCTT 15025 || |||||||||||||| || ||||| |||||||| | | || || | | | || | Sbjct 228933 ACCAAATGAAGGGTAGACTCCTTTTGGATGTTGTAGT--CAGACAAGGTGCGGCCATCCT 228990 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 | | |||||| ||||| | |||||||| |||||||| ||| || || ||||| || Sbjct 228991 CAAGTTGTTTTCCAGCAAAAATCAAACGTTGTTGGTCTGGTGGGATCCCCTCCTTATCCT 229050 Query 15086 AAA--TTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGT 15143 || |||||| || || | || || || || || || || | |||||| || Sbjct 229051 GAATCTTTTGC--TTGACGTTGTCGATTGTGTCTGAGGACTCAACCTCAAGGGTAATTGT 229108 Query 15144 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||||| ||||| ||||| ||||| ||||||||| Sbjct 229109 TTTACCAGTCAGCGTTTTAACAAAGATTTGCATA 229142 Score = 96.9 bits (106), Expect = 2e-15 Identities = 154/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAA--TTCTCGCGTCTT 15025 || |||||||||||||| || ||||| |||||||| | | || || | | | || | Sbjct 229161 ACCAAATGAAGGGTAGACTCCTTTTGGATGTTGTAGT--CAGACAAGGTGCGGCCATCCT 229218 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 | | |||||| ||||| | |||||||| |||||||| ||| || || ||||| || Sbjct 229219 CAAGTTGTTTTCCAGCAAAAATCAAACGTTGTTGGTCTGGTGGGATCCCCTCCTTATCCT 229278 Query 15086 AAA--TTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGT 15143 || |||||| || || | || || || || || || || | |||||| || Sbjct 229279 GAATCTTTTGC--TTGACGTTGTCGATTGTGTCTGAGGACTCAACCTCAAGGGTAATTGT 229336 Query 15144 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15180 |||||| ||||| ||||| ||||| || ||||| ||| Sbjct 229337 TTTACCAGTCAGCGTTTTGACAAAGATCTGCATTTTT 229373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391686388520