Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq7 168 8e-37 seq16 113 6e-20 >seq7 Length=1083452 Score = 168 bits (186), Expect = 8e-37 Identities = 603/933 (65%), Gaps = 20/933 (2%) Strand=Plus/Minus Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 || || || |||||||||| || || || | ||| || || |||||||| | | Sbjct 949208 GGCAGTGCAATTGACGCCAAGTTGCAAACCGCCACCTCGTCGTTTGACGTGTACTCGACA 949149 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 || || ||||||||||| || ||||| || || |||| ||||| || |||||||| Sbjct 949148 ATCTCTGTACACAAATTGGAGCTCTTGATTGTACCCAGGTTCTGCTGGTTTGACTTGCCA 949089 Query 116545 TTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 116604 || |||||||| ||||| ||||| || || || || || || | || || | ||||| Sbjct 949088 TTGCACGCATCTTTGTACAGCATGTACGGTGTTCCTGTTTCAATCTGCGAGTCCAGAATC 949029 Query 116605 GCCTTCCATACATCGGC--GGCTGGCACAGTGGCGTTGGCTCGCCCCTC---CTCCTCGT 116659 || | || ||| | || ||||| || | | || ||||||| | ||||| Sbjct 949028 GCGTACC--ACAGCTGCTGTGCTGGAACCTTCTTTCTTGCCAGCCCCTCTGTGTTCTCGT 948971 Query 116660 ACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTAT 116719 |||||||||| | ||||||||||| || ||| | |||| || ||| |||| | Sbjct 948970 ACTTTGTGTACAATGCCTCAAACTCCTCTCCCCAAACCTCGTGTAGATTTGGCGCCTCGT 948911 Query 116720 CTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGA 116779 ||| ||||| | | ||| | | | ||| ||||||||||| || | || || | Sbjct 948910 GTGGGCAGAACAAACTCCAGTCCCTATTGTCCAGCACCCGCTTCATAAACAAATCCGGAA 948851 Query 116780 TCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCT--TCATCCCCCTGATTGAGACG 116837 |||| | | | || | || || || |||| || | || || || || Sbjct 948850 TCCACATTCCATAAAACAAGTCACG--TGCCCTGTTCTCCTCCTTTCCGTGGTTCTTGCG 948793 Query 116838 CAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC 116897 ||| |||||| || | ||| ||||||||||| || |||||||| | ||| | || ||| Sbjct 948792 CAAACTCAAAAACTCAAAGATGTCCGCGTGCCATGGCTCCAGGTATATCGCAAATG-CCC 948734 Query 116898 CTTGC----GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCA 116953 || || | || | |||| |||||||| || || ||| ||||| || |||| Sbjct 948733 CTGGCCTCTTATTTCCTCCTTGGTCCACATACCTTGCTGTATGGTTGAATACTCGGAGCA 948674 Query 116954 TTGGAATGATACCATCAGATTGGCCATTTGTCCC--CCGAATACGAGACTTGTTGGCTCT 117011 |||| | || |||| ||| || || || || | |||||| | |||| || || Sbjct 948673 TTGGCACTATCCCATTCGATGTCCCGTTCGTTCCTGCTATGTACGAGTC-TGTT-GCCCT 948616 Query 117012 GACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGT 117071 || | || | || |||||| || ||||| ||||||| || || || | | | Sbjct 948615 GATGTTATGCACACTCAGACCAATTCCTCCTGCTGACTTTGATATCATCGCACATTGCTT 948556 Query 117072 GAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGA 117131 || | |||| ||||| || || |||||| ||| | | | | ||||| ||| Sbjct 948555 CAGTGTATCGTAAATCCCTTCAATAGAGTCATCCTGCATCGTCAGCAAAAAGCACGACGA 948496 Query 117132 CATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACC 117191 || || || | | |||||| | ||| || || ||||||| || || | |||| Sbjct 948495 CAACTGCGGACGCGTTGTACCCGAGTTAAACAGCGTTGGTGAGGCATGCGTAAACAGCTT 948436 Query 117192 TTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGAT 117251 || |||||| | | || ||||| | || || || || ||||| || || || | Sbjct 948435 CTGCGACATCATGTTATACGTCTCAATAACCGACTCTATATCGTCCCCATGGATCCCAAC 948376 Query 117252 TGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAG 117311 || | ||||| || ||| || || | ||| | | || || | |||| | Sbjct 948375 GCTAACTCTCATAATCAAGTACTGTGGCCTCTCCGCTGGCTTCCCGTCTATCCTCAACAA 948316 Query 117312 GTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 117344 ||| | |||||| ||||||| ||||| || Sbjct 948315 GTACGACCTCTCCAGTGTCTTGAATCCAAAGTA 948283 Score = 91.5 bits (100), Expect = 2e-13 Identities = 154/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 115551 CTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCAT 115610 ||| | ||| ||||||||||| || ||||||||||||| ||||||| |||| | |||||| Sbjct 950133 CTTGGTTCGCAGGTAGTACATGCCGGTCTTGAGCCCCTTCTTCCAGCCATAGAAATGCAT 950074 Query 115611 TGAGGACAACTT-GGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGAT 115669 | | || | ||| ||||| | |||||| || ||| | || ||||| | Sbjct 950073 GCTTGTGAGTTTCTGGTAGT-TTGGATTGTCCATGTGGATGTTTAGCGACTGCGATTGGT 950015 Query 115670 CGATG-AAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCAC 115728 | ||| ||||| ||||| || || | | ||||| ||| |||| |||||| || || Sbjct 950014 CAATGTAAGCG-CCCCGGTCAGCTGATAGGTCAATGACAATCTTCTGCTTGATCTCGTAC 949956 Query 115729 ACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATC 115766 |||||| |||| || | ||| | ||| ||| || || Sbjct 949955 ACAGTTTTGTACAGCTCCTTCAGGTCAGATGGAATTTC 949918 >seq16 Length=823159 Score = 113 bits (124), Expect = 6e-20 Identities = 293/444 (66%), Gaps = 2/444 (0%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| ||| ||| | || || || ||| | || || ||||| ||||| || ||| Sbjct 377087 GCAAAGTCTGTGTGTAACCCTTCATCGCGGCAAATAAGCTCATTGGAGAATGTAAGTCCT 377146 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| || || | ||| || | ||||||||| || ||| || || || ||||| || Sbjct 377147 GGCATCAGCCCTCTCTTTTTGAGCCAGAAAATTGCTGCAAACGATCCTGAAAAGAAAATA 377206 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAA 127698 ||||| || || ||||| | |||||| |||| | | | | | || ||||| Sbjct 377207 CCCTCAACTACTGCAAACGCCGCCAAACGCTCACCAAATG-GTGCCTCATCGTCATCAAT 377265 Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAA 127758 |||||||| ||||||| |||||||| | || || || | | | | || || | ||| Sbjct 377266 CCACTTCAGGGCCCACTTTGCCTTTTCTCCAATGCACGGAATGTTGTCAATTGCGTTAAA 377325 Query 127759 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 127818 || | ||||| |||| ||||| ||||| | || | || ||| || |||| Sbjct 377326 CAGGTGGTTCTTCTCTGCCTCATCTTGAATGTATGTGTCCAGCAGCAGTGAGTACATTTC 377385 Query 127819 GCCGTGGACCATTTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTG 127878 || ||| | | ||| | | || || | |||||| | | || || ||||| Sbjct 377386 GCTGTGAATGTTCTCAATCATGATTTGGAACCCATAGAAACATCTTGCCTCTGGAATCTG 377445 Query 127879 TACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 127938 |||||||| | ||| ||| | | || ||| ||||||||||| || ||||||| Sbjct 377446 TACCTCATTGCTAAAGTTGCTCACCAGGTTTTCATTGACAATTCCATCCGAGGCAGCAAA 377505 Query 127939 AAACGCCAGGATATACTTTATGAA 127962 || || ||||| | ||| || || Sbjct 377506 GAATGCTAGGATGTTCTTGATAAA 377529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506647843520