Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq16 120 5e-22 seq7 105 1e-17 >seq16 Length=823159 Score = 120 bits (132), Expect = 5e-22 Identities = 523/821 (64%), Gaps = 16/821 (2%) Strand=Plus/Plus Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687 ||||| ||| | || ||| || |||||||||||||||||||| | ||| || || Sbjct 376792 CTTCTGGTAGTCGGAAACACGTTTTTCGAAAAAGTTGGTCTTGCCTTGCATTGAAATCAT 376851 Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAG 159747 ||||| || | ||||| |||| | || ||| | || | ||||| ||||| || Sbjct 376852 GTCCATAAAGTCAAATGGATTCTGCGAGTTGTAGTGTTTGGAGAATCCCAGAGCTATGAG 376911 Query 159748 CAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAG 159807 || || || || ||||| || ||||| |||||| | ||| ||| || || | ||| Sbjct 376912 CAGTCTATCGGCAACAAACTCAATGTATTGGCACATCAGTGCACTGTTCATTCCGATCAG 376971 Query 159808 CCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAAT 159867 | || || | || || | || |||| | ||||| | || || || |||||| Sbjct 376972 CGATACTGGCAACGACTCTGTCAAGAACTTTTGTTCAATGACAACAGCCTCAAGCACAAT 377031 Query 159868 CTGCGAGACACGTTCGTACCCC----GGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGC 159923 | ||| || | || | |||||| | ||| | || || || | Sbjct 377032 GCCCCTGACC--TTGG--CCTCAGAAGGCTTGTTGCTGAGATGGC---TGAATAGCAGAC 377084 Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983 | |||||||| ||| | || || || || | || | ||| ||||| | | || | Sbjct 377085 AGGCAAAGTCTGTGTGTAACCCTTCATCGCGGCAAATAAGCTCATTGGAGAATGTAAGTC 377144 Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043 | ||||| | ||| | | ||||||||| ||||| || ||||| | || ||| || | Sbjct 377145 CTGGCATCAGCCCTCTCTTTTTGAGCCAGAAAATTGCTGCAAACGATCCTGAAAAGAAAA 377204 Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGG 160103 | ||||| || | ||||||||| | | | ||||||||| | || | ||||| Sbjct 377205 TACCCTCAACTACTGCAAACGCCGCCAAACGCTCACCAAATGGTGCCTCATCGTCATCAA 377264 Query 160104 TCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAA 160163 ||||| | |||||| | ||||| | | | |||||||| ||| || | ||||||| Sbjct 377265 TCCACTTCAGGGCCCACTTTGCCTTTTCTCCAATGCACGGAATGTTGTCAATTGCGTTAA 377324 Query 160164 ACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTT 160223 ||| || || ||| | |||| | || || | | |||| |||||||||| Sbjct 377325 ACAGGTGGTTCTTCTCTGCCTCATCTTGAATGTATGTGTCCAGCAGCAGTGAGTACATTT 377384 Query 160224 CTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACT 160283 | ||| | || || || || || || |||||| || | ||||| || || Sbjct 377385 CGCTGTGAATGTTCTCAATCATGATTTGGAACCCATAGAAACATCTTGCCTCTGGAATCT 377444 Query 160284 GCACCTCCTGTGTGAACCTTTGAC-CCAGATTGGCATTAACCAACCCGTCGGCGGCCGCA 160342 | ||||| | || || || | |||| || |||| || | || || | ||| ||| Sbjct 377445 GTACCTCAT-TGCTAAAGTTGCTCACCAGGTTTTCATTGACAATTCCATCCGAGGCAGCA 377503 Query 160343 AAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAG 160402 ||||| || | | || ||| || | | ||||| || || |||||||||| Sbjct 377504 AAGAATGCTAGGATGTTCTTGATAAAGTAACGCTCGTGTTCTGAAAG---CTTTTCCCAG 377560 Query 160403 TGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCA 160443 ||| | ||| || | | ||| ||||| || ||| |||| Sbjct 377561 TGTATTTTGTCATGTGAGAGATCCACCTCCTCAGCGTTCCA 377601 >seq7 Length=1083452 Score = 105 bits (116), Expect = 1e-17 Identities = 479/744 (64%), Gaps = 23/744 (3%) Strand=Plus/Minus Query 203868 CGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACA 203927 |||||||| || ||| ||| ||||||||||||||||| || ||||||| ||| || || | Sbjct 950140 CGGCAGGCTTGGTTCGCAGGTAGTACATGCCGGTCTTGAGCCCCTTCTTCCAGCCATAGA 950081 Query 203928 TGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGC 203987 |||||| | ||||| ||| || | | ||||||| ||||| || ||||| Sbjct 950080 AATGCATGCTTGTGAGTTTCTGGTAGTTTGGATTGTCCATGTGGATGTTTAGCGACTGCG 950021 Query 203988 TTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCT 204047 |||||| ||| ||| |||| || || | | | || | |||||||| |||| Sbjct 950020 ATTGGTCAATGTAAGCGCCCCGGTCAGCTGATAGGTCAATGACAATCTTCTGCTTGATCT 949961 Query 204048 CCCACACCGTCTTGAACACGTC--TCTGGTGTGTTGAGGCACATCTTCCCACGTCCTG-A 204104 | |||| || ||| ||| || || ||| | | || | || | | || ||| | Sbjct 949960 CGTACACAGTTTTGTACAGCTCCTTCAGGTCAGAT--GGAATTTCGT-TGATGTACTGTA 949904 Query 204105 TCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTCCTCCCCCCACA--TGCCCAACCT 204162 || ||||||| || || | | | | | || ||| ||||| | | || Sbjct 949903 CAGACCCGTTGTGTGCAATTATGGCCTGGCGCATGTCGTCCGACCACAACTTTCTCTCC- 949845 Query 204163 GATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCG 204222 | || || | || ||| ||||||| | ||| || || || | || || | || Sbjct 949844 -ACAAGGTCTCTCAGCAGCCACGGGTTGACTACCTGGAACTCACCTGCAAGAACTCTTCT 949786 Query 204223 GGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGT 204282 ||| | | ||| |||| |||| || || |||||||| || | ||||| ||| | Sbjct 949785 TGTGTAAATGTTTGAGGTGTATGGCTCAAAGCACTCGTTGTACCCCAGAATCT--GCGAT 949728 Query 204283 GCTG--GCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACC 204340 | || || || ||||| || ||||| ||||| ||||| | || || | |||| | | Sbjct 949727 GTTGACGCTGTAGGCATTGGCGCCAGCAGCAGCGAGTTTCTGACTCCATGTTTTGCTATC 949668 Query 204341 CTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAAC 204400 | || |||| | |||||| || | || || | || ||||||| || | | Sbjct 949667 TTTTGCCTCAGCTCTGCCCAGTCCCACAGGTCGCTTGGCTCAACTCCCCACAGATCCATC 949608 Query 204401 TGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTCGGATAAGG-CTGATCCTCTTC 204459 || | | |||| || | ||| ||||||| ||| |||| || || | | || || | Sbjct 949607 TGTAGTTTTCCTTTGCTCATTGGACTGCCCTCGTATGTCGAGTAGGGTCCGTTCTTCAT- 949549 Query 204460 TGCCAGCTTGCACGAGGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTGAACGTT 204519 |||||| | |||||| | | | || | ||||| |||||| || ||| | ||| Sbjct 949548 TGCCAGTTCGCACGACACTTCAAGAGCTGCGTGGTACAGGGTCTCGAAAATCAGCTTGTT 949489 Query 204520 TA-ATC--TGGCGGCCTCCGTTCCGTCAAACGCCAGACCCAGCATGGCAAACACGTCCGC 204576 | || |||| |||| | ||||||| ||| | |||||| |||| |||| || Sbjct 949488 GAGCTCCTTGGCCCCCTCAG---ACTCAAACGGCAGCCTCAGCATCAAAAACGCGTCGGC 949432 Query 204577 CAAGCCCTGCACTCCGATTCCCAA 204600 || || || || || | |||||| Sbjct 949431 CAGCCCTTGAACCCCCA-TCCCAA 949409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154484360320