Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq29 286 1e-71 seq56 145 3e-29 seq16 136 2e-26 >seq29 Length=252028 Score = 286 bits (316), Expect = 1e-71 Identities = 1049/1613 (65%), Gaps = 61/1613 (4%) Strand=Plus/Minus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||| |||||||| ||| | ||||| || | |||||||| || || | ||||||| | Sbjct 108653 AGCTATTGGAATAGATTTGGGAACAACATACTCATGTGTGGGAGTATGGCAAAATGACAG 108594 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032 ||||| || || |||||||| ||||| || || || || || | ||| ||||| Sbjct 108593 AGTAGAGATAATTGCAAATGATCAAGGTAACCGTACAACACCATCGTATGTAGCATTTAC 108534 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAA-TGGTAAATTCAAATGCCAA 451089 ||| || ||| | | || | || || || | || ||| || | || |||| Sbjct 108533 AGATGATGAGAGATTGGTGGGAGATGCAGCAAAGAACCAGGTGGCAA--TGAAC--CCAA 108478 Query 451090 -AAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTAC 451148 ||||||||| | ||| | ||| || || ||||| ||| || |||||| | || | Sbjct 108477 CAAACACAGTGTTTGACGTTAAGCGGTTGATTGGGCGTCGGTTTGATGAGGCAGAGGTGC 108418 Query 451149 AAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGG--AAAGCCCTATAT 451206 || ||| | || |||||| || | || || ||| | || |||||| || | Sbjct 108417 AATCAGACATGAAGCACTTTTCATACAAGGTGGTG--TCAGAGGGGGGAAAGCCA-ATGT 108361 Query 451207 TCAAG-TAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGG 451265 | || || | || || || || || || || ||| || || || | ||||| ||| Sbjct 108360 GCCAGGTAGAGTACAAGGGAGAGACAAAGACATTTAGCCCAGAGGAGGTATCATCGATGA 108301 Query 451266 TTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAG 451325 | | || || ||||| || |||||||| || |||||| | ||| | ||||||| Sbjct 108300 TATTGACAAAGATGAAGGAGACAGCAGAGGCATTTATTGGAACAGAAGTGAAGGATGCAG 108241 Query 451326 TAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGAC 451385 | | || || || || || || || ||| | || | |||||||| || |||||||| | Sbjct 108240 TTGTAACAGTACCAGCATACTTTAACGATTCGCAGAGACAAGCAACAAAGGATGCAGGGC 108181 Query 451386 ATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCAT 451445 |||||| || || || || || || |||||||| || || |||||||| || |||||| Sbjct 108180 TTATTGCAGGATTGAACGTGCTCCGTATTATTAACGAGCCAACAGCAGCAGCGATAGCAT 108121 Query 451446 ATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTG 451505 ||||||| ||| || || | | | ||| || | || |||||||||| || | Sbjct 108120 ATGGACT-GGACAA--GAAGGCAGTTGGAGAGAAGTTGGTATTGATATTTGATTTGGGAG 108064 Query 451506 GAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAA 451565 | ||||| ||| ||| | || ||||||||||| ||| | || || || ||| ||| Sbjct 108063 GCGGAACATTTGACGTTTCGTTGCTGTCAATTGAAGACGGGATTTTCGAGGTCAAGTCAA 108004 Query 451566 CCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAATGGTTGA 451625 | || || || ||| | || || ||||| |||| || | ||||| | | || | Sbjct 108003 CAGCAGGAGACACACATTTGGGGGGAGAAGACTTTGACAACAGACTTGTGAACTTTTTCA 107944 Query 451626 AAACTGATGTTCAA-CGAAAACTAAAAGTAGATATTTCTACTAACCAAAAAGCACTTAGA 451684 || |||||| || || | || || || || | |||| || ||||||| | Sbjct 107943 GTGAAGA-GTTCAAGCGCAAGTTCAAGAAGGACATGTCAAAGAACCCAAGAGCACTTCGT 107885 Query 451685 CGTCTTAAAACATCAGCAGAAAAAGCTAAAATTACACT---CAGTTCAACACAAACTACT 451741 ||| | | |||| || |||| ||| || |||| | || |||||||||| || Sbjct 107884 CGTTTGAGAACAGCATGTGAAAGAGCAAAGCGTACATTGTCAAGCGCAACACAAACCAC- 107826 Query 451742 AGTATAAACATTGATAGTTTAGTTGATGGAATGGATTATGCTACTACTCTTACCCGTGCT 451801 ||| || || || ||||| |||| |||| |||| ||| | | || |||||| Sbjct 107825 AGTTGAA--ATCGACAGTTTGTTTGAAGGAACAGATTTCTACACTTCAATCACACGTGCT 107768 Query 451802 AAATTTGAA----TCA------ATTTGTTCCAG---TATTTTTGCACGGGTAATGAAACC 451848 |||||| ||| | ||||| ||| || | ||| | ||| ||| Sbjct 107767 CGTTTTGAAGAACTCAACAATGACTTGTT-CAGATCTACTCTTGACCCAGTAGAGAA--- 107712 Query 451849 TGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGATGAAATTGTGCT 451908 | || ||| | || | | | | | ||| | || | |||||||| || Sbjct 107711 -GGTGCTCAGAGACGCCAAG-TGCGACA---AGTCA----CAAGTCAGCGAAATTGTTCT 107661 Query 451909 TGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATTTTGGAGG 451968 ||| || || || || || ||||| || | || | ||| | ||| | || || Sbjct 107660 TGTTGGTGGATCCACCCGTATTCCAAAGGTGCAGAAAATGATTTCTGACTTCTTCAACGG 107601 Query 451969 AAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCA 452028 |||| |||| ||| | | ||||||||||| |||||||| ||||| || || ||||| Sbjct 107600 AAAAGAACTCGACAAGTCCATCAATCCTGATGAGGCTGTTGCTTATGGAGCCGCTGTTCA 107541 Query 452029 AGCAGCTATTCTAACAGGT-TCAGAT--GATGAAAAATTAGGAGATATTCTGTTAGTAGA 452085 || || ||||| || ||| || | || ||| | | ||| || || | | || Sbjct 107540 GGCCGCCATTCTTACTGGTGACACTTCCGA-GAAGACCCA--AGACCTTTTGCTTCTTGA 107484 Query 452086 TGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAA 452145 ||| | || || |||||||| |||| || |||||||| | |||||| | || || Sbjct 107483 TGTTGCCCCGCTTTCTCTTGGCATTGAGACTGCTGGTGGTGTCATGACTGCCCTCATCAA 107424 Query 452146 ACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAA--GTGATAAC 452203 || || || ||||||| || | |||| | || | | || | |||||| Sbjct 107423 GCGCAACACCACTGTTCCTTGCAAGA--AGTCCGAGATCTTCTCCACTTACGCCGATAAC 107366 Query 452204 CAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAAT 452263 ||||||||||| || || || | |||||| |||||| ||| || || || || Sbjct 107365 CAACCAGGTGTCCTCATCCAGGTCTATGAAGGTGAACGTACAAGAACCAAGGACAACAAC 107306 Query 452264 AAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATT 452323 | || || | || || || ||||| || || | || ||||||| | Sbjct 107305 ATGCTTGGTAAGTTCGAACTCTCCGGAATTCCCCCAGCTCCTCGCGGTGTTCCTCAAGTC 107246 Query 452324 GAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCA 452383 ||| | |||| ||| || ||||| |||||||| || || || ||| ||||| || | Sbjct 107245 GAAGTCACCTTTGACGTCGATGCCAATGGTATCCTCAACGTCTCTGCTGTTGACAAGACC 107186 Query 452384 TCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGAT 452443 | ||||| ||| | || || || || ||||| |||||| |||| | || ||||||||| Sbjct 107185 ACCGGAAAGTCAAACAAGATCACCATCACTAACGATAAAGGCCGTCTCTCCAAAGAAGAT 107126 Query 452444 ATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGAACAAGT 452496 |||||| ||| | |||| || ||||| | |||| | |||||||| |||| Sbjct 107125 ATTGAACGCATGATCAATGAGGCTGAAAAGTACAAGAAGGATGATGAGGAAGT 107073 >seq56 Length=671324 Score = 145 bits (160), Expect = 3e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 391045 TTATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAAT 391104 ||| |||| | ||||| || || ||||| ||||| || || || || || || || |||| Sbjct 567604 TTAGAATGCAGATTTTTGTAAAGACACTAACTGGGAAGACCATCACCCTCGAGGTGGAAT 567663 Query 391105 CATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTG 391164 | || |||| ||| || |||||||||| || || ||||||||||||||||| || | Sbjct 567664 CTTCAGATACCATCGATAACGTTAAACAAAAGATCCAGGATAAGGAAGGAATTCCCCCAG 567723 Query 391165 ATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATT 391224 |||| |||||||| ||||| | || || |||||||| ||||| | || ||| | || | Sbjct 567724 ATCAGCAACGTTTGATTTTTGCCGGTAAGCAACTTGAGGATGGCCGTACCTTGTCCGACT 567783 Query 391225 ATAATATTGATAAGGATGCAACACTTCACTTAGTA 391259 | || || | ||||| | || |||||||| ||| Sbjct 567784 ACAACATCCAAAAGGAATCCACTCTTCACTTGGTA 567818 >seq16 Length=823159 Score = 136 bits (150), Expect = 2e-26 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || |||||||| |||||||||||||| ||||| ||||| ||||| || || Sbjct 228685 ATGCAAATCTTTGTTAAAACGCTGACTGGTAAAACAATTACCCTTGAGGTTGAGTCCTCA 228626 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || ||||| ||||| |||||||| || || || || || ||| Sbjct 228625 GACACAATCGACAACGTCAAGCAAAAGATTCAGGATAAGGAGGGGATCCCACCAGACCAA 228566 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| ||||| | || ||||||||||| ||||| | || ||| | || || || Sbjct 228565 CAACGTTTGATTTTTGCTGGAAAACAACTTGAGGATGGCCGCACCTTGTCTGACTACAAC 228506 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTA 391259 || | ||||| | || || ||||| ||| Sbjct 228505 ATCCAAAAGGAGTCTACCCTGCACTTGGTA 228476 Score = 136 bits (150), Expect = 2e-26 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || |||||||| |||||||||||||| ||||| ||||| ||||| || || Sbjct 228913 ATGCAAATCTTTGTTAAAACGCTGACTGGTAAAACAATTACCCTTGAGGTTGAGTCCTCA 228854 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || ||||| ||||| |||||||| || || || || || ||| Sbjct 228853 GACACAATCGACAACGTCAAGCAAAAGATTCAGGATAAGGAGGGGATCCCACCAGACCAA 228794 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| ||||| | || ||||||||||| ||||| | || ||| | || || || Sbjct 228793 CAACGTTTGATTTTTGCTGGAAAACAACTTGAGGATGGCCGCACCTTGTCTGACTACAAC 228734 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTA 391259 || | ||||| | || ||||| || ||| Sbjct 228733 ATCCAAAAGGAGTCTACCCTTCATTTGGTA 228704 Score = 136 bits (150), Expect = 2e-26 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || |||||||| |||||||||||||| ||||| ||||| ||||| || || Sbjct 229141 ATGCAAATCTTTGTTAAAACGCTGACTGGTAAAACAATTACCCTTGAGGTTGAGTCCTCA 229082 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || ||||| ||||| |||||||| || || || || || ||| Sbjct 229081 GACACAATCGACAACGTCAAGCAAAAGATTCAGGATAAGGAGGGGATCCCACCAGACCAA 229022 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| ||||| | || ||||||||||| ||||| | || ||| | || || || Sbjct 229021 CAACGTTTGATTTTTGCTGGAAAACAACTTGAGGATGGCCGCACCTTGTCTGACTACAAC 228962 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTA 391259 || | ||||| | || ||||| || ||| Sbjct 228961 ATCCAAAAGGAGTCTACCCTTCATTTGGTA 228932 Score = 136 bits (150), Expect = 2e-26 Identities = 164/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 391037 ATATTATATTATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGA 391096 ||| || || | |||| | || || || ||||| |||||||||||||| ||||| ||||| Sbjct 229382 ATACTAGATAAAAATGCAGATCTTTGTCAAAACGCTGACTGGTAAAACAATTACCCTTGA 229323 Query 391097 TGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAAT 391156 ||||| || || || | || || | || ||||| ||||| |||||||| || || Sbjct 229322 GGTTGAGTCCTCAGACACAATCGACAACGTCAAGCAAAAGATTCAGGATAAGGAGGGGAT 229263 Query 391157 TCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTT 391216 || || || ||||||||||| ||||| | || ||||||||||| ||||| | || || Sbjct 229262 CCCACCAGACCAACAACGTTTGATTTTTGCTGGAAAACAACTTGAGGATGGCCGCACCTT 229203 Query 391217 GGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGTA 391259 | | || || || || | ||||| | || ||||| || ||| Sbjct 229202 GTCTGACTACAACATCCAAAAGGAGTCTACCCTTCATTTGGTA 229160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975716577399776