Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq29 367 1e-95 seq5 199 3e-45 seq14 163 2e-34 >seq29 Length=252028 Score = 367 bits (406), Expect = 1e-95 Identities = 1053/1597 (66%), Gaps = 23/1597 (1%) Strand=Plus/Plus Query 517146 CTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTC 517205 |||||| | || || ||| || | ||||| | ||||| | |||| |||| | | Sbjct 107087 CTTCTTGTACTT-TTCAGCCTCATTGATCATGCGTTCAATATCTTCTTTGGAGAGACGGC 107145 Query 517206 CGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCA 517265 | || ||||| || || || || || || || || | || ||| | |||| | Sbjct 107146 CTTTATCGTTAGTGATGGTGATCTTGTTTGACTTTCCGGTGGTCTTGTCAACAGCAGAGA 107205 Query 517266 CATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCT 517325 | || || |||||||||||||| | ||||| |||||||| | |||||| || || | Sbjct 107206 CGTTGAGGATACCATTGGCATCGACGTCAAAGGTGACTTCGACTTGAGGAACACCGCGAG 107265 Query 517326 GAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATT 517385 |||| || || || || | | || | || || | || || || || || | Sbjct 107266 GAGCTGGGGGAATTCCGGAGAGTTCGAACTTACCAAGCATGTTGTTGTCCTTGGTTCTTG 107325 Query 517386 TTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAA 517445 | |||||||| || | | ||||| || | | ||| ||||| | ||||| | | Sbjct 107326 TACGTTCACCTTCATAGACCTGGATGAGGACACCTGGTTGGTTATCGGCGTAAGTGGAGA 107385 Query 517446 ATACTCT-GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATA 517504 | | ||| ||| || || ||||||| || ||||| | | || | ||||| | | Sbjct 107386 AGA-TCTCGGACTTCTTGCAAGGAACAGTGGTGTTGCGCTTGATGAGGGCAGTCATGACA 107444 Query 517505 CCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGA 517564 ||||| || || || | ||||||||||| || | ||||||| || | || | ||| Sbjct 107445 CCACCAGCAGTCTCAATGCCAAGAGAAAGCGGGGCAACATCAAGAAGCAAAAGGTCTTGG 107504 Query 517565 AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 517624 || || ||| | |||| |||||| || || |||| ||| || ||||| |||||| Sbjct 107505 GTCTTCTCGGAAGTGTCACCAGTAAGAATGGCGGCCTGAACAGCGGCTCCATAAGCAACA 107564 Query 517625 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGT 517684 || ||||||||||| | | | | |||| ||| || ||||| || | |||| | | Sbjct 107565 GCCTCATCAGGATTGATGGACTTGTCGAGTTCTTTTCCGTTGAAGAAGTCAGAAATCATT 107624 Query 517685 TGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 517743 | ||| ||||| |||||||| | ||||| ||||| | |||||||| || ||||| Sbjct 107625 T-TCTGCACCTTTGGAATACGGGTGGATCCACCAACAAGAACAATTTCGCTGACTTGTGA 107683 Query 517744 TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAA 517803 || || || | || | || || || || || |||||| | ||| ||||| Sbjct 107684 CTTGTCGCACTTGGCGTCTCTGAGCACCTTCTCTACTGGGTCAAGAGTAGATCTGAACAA 107743 Query 517804 GTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCT 517861 ||| |||||||| || ||| | || || ||| | || || || ||||| Sbjct 107744 GTCATTGTTGAGTTCTTCAAAACGAGCACGTGT--GATTGAAGTGTAGAAATCTGTTCCT 107801 Query 517862 TCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCA 517921 || |||||| || | ||||| || ||||| || | || | || ||| || || Sbjct 107802 TCAAACAAACTGTCGATTTCAACTGTGGTTTGTGTTGCGCTTGACAATGTACGCTTTGCT 107861 Query 517922 CGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC--TGATTGATTCAAATCTGTTT 517979 | |||||||||||| || | | || | ||| ||| | |||| || || | | Sbjct 107862 CTTTCACATGCTGTTCTCAAACGACGAAGTGCTCTTGGGTTCTTTGA--CATGTCCTTCT 107919 Query 517980 TATATTTTCTCTTGAAATCTTCAACACACCATGTT-ACAAGACGATTATCAAAATCTTCA 518038 | | || | |||||| |||||| | | | ||| ||||| | || ||||| ||||| Sbjct 107920 TGAACTTGCGCTTGAACTCTTCA-CTGAAAAAGTTCACAAGTCTGTTGTCAAAGTCTTCT 107978 Query 518039 CCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGAC 518098 || ||||| | || | ||||| || | | || | ||||| || ||||||| ||| Sbjct 107979 CCCCCCAAATGTGTGTCTCCTGCTGTTGACTTGACCTCGAAAATCCCGTCTTCAATTGAC 108038 Query 518099 AAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTG 518158 | | | || ||| ||||| || |||| |||||| || | ||| | | ||| Sbjct 108039 AGCAACGAAACGTCAAATGTTCCGCCTCCCAAATCAAATATCAATACCAACTTCTCTCCA 108098 Query 518159 TCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC 518218 || || || || || ||||| || | || || || ||||| || |||||||| | Sbjct 108099 ACTGCCTTCTTGTCCAGTCCATATGCTATCGCTGCTGCTGTTGGCTCGTTAATAATACGG 108158 Query 518219 AAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTA 518278 | || || | || ||||| |||||||| || || |||||||| || ||||||||| Sbjct 108159 AGCACGTTCAATCCTGCAATAAGCCCTGCATCCTTTGTTGCTTGTCTCTGCGAATCGTTA 108218 Query 518279 AAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCC 518338 || ||||| || || || | ||| ||||| | |||||| | |||||| | || ||| Sbjct 108219 AAGTATGCTGGTACTGTTACAACTGCATCCTTCACTTCTGTTCCAATAAATGCCTCTGCT 108278 Query 518339 GTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGAT 518398 || | ||||| || | || ||||| ||||| | | |||||| | || ||| | Sbjct 108279 GTCTCCTTCATCTTTGTCAATATCATCGATGATACCTCCTCTGGGCTAAATGTCTTTGTC 108338 Query 518399 TCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATA--ACTTTAAATG 518456 || | || ||| | | ||| | || || | | | | || || ||| Sbjct 108339 TCTCCCTTGTACTCTACCTGGCACATTGGCT--TTCCCCCCTCTGACACCACCTTGTATG 108396 Query 518457 GCCAGTATTTCATATCTGATTGAACACTTTG-GTCATTAAAATCTCTACCAATTAATCGT 518515 ||| ||||| |||||||| || || || |||| ||| | ||||| || || Sbjct 108397 AAAAGTGCTTCATGTCTGATTGCAC-CTCTGCCTCATCAAACCGACGCCCAATCAACCGC 108455 Query 518516 TTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCA 518575 || | ||||| | || || ||||| || ||||| | || | || ||||||||||| Sbjct 108456 TTAACGTCAAACACTGTGTTTGTTGGGTTCATTGCCACCTGGTTCTTTGCTGCATCTCCC 108515 Query 518576 ATCAGATGT-TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATC 518634 | || || | || |||||||||| ||||| ||||| ||||| || ||||||||||| Sbjct 108516 ACCA-ATCTCTCATCATCTGTAAATGCTACATACGATGGTGTTGTACGGTTACCTTGATC 108574 Query 518635 ATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCC 518694 ||| ||||| || || ||| | ||||||||||||| || ||||| | |||||||| Sbjct 108575 ATTTGCAATTATCTCTACTCTGTCATTTTGCCATACTCCCACACATGAGTATGTTGTTCC 108634 Query 518695 TAAATCAATACCAATAGCAATTTTATCTGACATTATT 518731 ||||| || |||||||| || | |||||||| || Sbjct 108635 CAAATCTATTCCAATAGCTTTTGTTCCTGACATTTTT 108671 >seq5 Length=1009252 Score = 199 bits (220), Expect = 3e-45 Identities = 470/696 (68%), Gaps = 18/696 (3%) Strand=Plus/Minus Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083 ||||||||||||| |||||||| | |||| ||| || || || ||||| || | | Sbjct 523578 TTATCAAAATCTTGTCCTCCCAAATGGGTATCTCCGGATGTGGCCAATACTTCAAACACT 523519 Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143 ||||| |||| || | ||| | ||||||| |||||||| |||| |||| | | | Sbjct 523518 CCATCATCAATAGCGAGAAGCGATACATCAAAAGTTCCACCTCCCAGATCATATACCA-- 523461 Query 518144 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203 | || | ||| | ||| || || || | ||| || |||| || || || |||||| Sbjct 523460 AAATGTGTCTCTCTC-CTTCCTTCTTGTCCAAACCGTAAGCAATGGCTGCTGCTGTTGGT 523402 Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 518263 ||||| | |||||| | || ||||| || | ||| |||||| ||||| ||||||||| Sbjct 523401 TCATTTACAATTCTGAGCACGTTAAGTCCTGAAATGGCTCCTGCGTCTTTGGTGGCTTGT 523342 Query 518264 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTT--CTTTAC 518321 ||||| | ||| || || || || || || | |||||| | ||||||| | | | Sbjct 523341 CTTTGGGCATCTGAGAAGTAGGCTGGTACTGTTACAACGGCGTGTGTTACTTTGGTGTTC 523282 Query 518322 CAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 518381 | ||| || || ||| ||||| || || | ||||| ||||| || ||||| Sbjct 523281 AAGTAT--GCCTCAGCGATTTCCTTCATCTTTGACAATACCATTGCTGAAACTTCTTCTG 523224 Query 518382 GGGAATATTGCTTGGATTCAT-TTTGATATGATACTTCAAAATATGG--TTTATTACCAA 518438 | | || ||| ||| | ||||| || |||||||| ||| | | || Sbjct 523223 GTGTGAATGTCTTCTTTTCGTCATTGAT-TGTAACTTCAAACACTGGACGGTTTGACTTG 523165 Query 518439 CATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAAT 518498 | | ||| | ||||||||||| ||||| || | ||| | ||||||||| | Sbjct 523164 CCCT--TAAGTGAAAATGGCCAGTTCTTCATGTCACGCTTAACTTCCTTGTCATTAAAGT 523107 Query 518499 CTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGAT 518558 | || || || || || | ||||| | || || ||| || | || ||||||| Sbjct 523106 TCATTCCGATCAAACGCTTGGAGTCAAACAGTGTGTTTTCTGGGTTGCTGGCGGCTTGAT 523047 Query 518559 ATTTGGCTGCATCTCCAATCAGATGTTC--TGT-CTCTGTAAATGAAACATATGATGGAG 518615 |||||||||||||||| || || ||| || || | | ||||||||||| | Sbjct 523046 TCTTGGCTGCATCTCCAACAAGTCTCTCGTTGTCCTTGGTCCAGGCTACATATGATGGGG 522987 Query 518616 TTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATT-TTGCCATACACCT 518674 | | || || ||||| || || ||||||||||| || |||||| ||| | ||||| Sbjct 522986 TAATACGGTTTCCTTGCTCGTTGGCAATAATTTCTACACGACCATTCTTGTGA-ACACCA 522928 Query 518675 ACACAACTAAAAGTTGTTCCTAAATCAATACCAATA 518710 ||||| | |||||||| ||||||||||||||| Sbjct 522927 ACACAGGAGTATGTTGTTCCCAAATCAATACCAATA 522892 >seq14 Length=408299 Score = 163 bits (180), Expect = 2e-34 Identities = 461/697 (66%), Gaps = 16/697 (2%) Strand=Plus/Plus Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083 || ||||||||||| |||||||| | || | ||| | || || ||||| ||| | | Sbjct 321116 TTGTCAAAATCTTCTCCTCCCAAATGGGTGTCTCCGGCTGTTGCCTTTACTGAGAAGATT 321175 Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143 || || | || | | | |||||| |||||||| |||| ||||||||| | Sbjct 321176 CCTCCTGTGATTGAAAGCAATGAAACATCAAAAGTTCCACCTCCCAAATCAAAAATCAAA 321235 Query 518144 ACATTCATTTCTTTGTCTTGGTTTT--TATCAAGACCATACGCAAAAGCAGCAGCAGTTG 518201 || | | |||| || || | || | || | |||||| |||| ||| || || |||| Sbjct 321236 ACTTGC--TTCTCGGTTGTGCTCTTGGTGTCCAAACCATAAGCAATAGCTGCGGCTGTTG 321293 Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261 | || || ||||| | || ||| | ||| || | ||| |||| ||||| || ||||| | Sbjct 321294 GCTCGTTGATAATACGCAGAACCTCAAGTCCTGAGATTGTTCCGGCATCCTTGGTGGCAT 321353 Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT-TCTTTA 518320 | || || ||| |||| || || || || || || ||||| | | || ||||| Sbjct 321354 TACGCTGGGAGTCGCTAAAGTAGGCTGGTACTGTGATGACGGCCTTCTTGACGGTCTTTC 321413 Query 518321 CCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCT 518380 |||| | || ||| | ||||| || | |||||||||||||| || | || | Sbjct 321414 CCAACTTG-GCTTCTGCTACCTCCTTCATCTTGATCAAAATCATTGATGAGATCTCTTGT 321472 Query 518381 GGGGAATATTGCTTGGATTCATTT-TGATATGATACTTCAAAATATGGTTTA---TTACC 518436 || || ||| ||| || ||| | | || | || |||| | || | Sbjct 321473 GGTGAGAATTCCTTCTTCTCGCCACTGACTTCAACCTGGATAA-ATGGCTGTGCGTTGCG 321531 Query 518437 AACATTAATAACTTTAAATGGCCAGTATTTCATATC-TGATTGAACACTTTGGTCATTAA 518495 | | ||| || |||||||||| | || | |||| | || ||||| || Sbjct 321532 GTCT---ACAACCTTGAATGGCCAGTGAGCACTGTCCTTCTTGA-CGTGTTCGTCATCAA 321587 Query 518496 AATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTT 518555 || | |||||| || || || | ||||| | || |||| ||| || ||||| | | Sbjct 321588 AACGACGACCAATCAAACGCTTAACGTCAAATACTGTGTTGGCTGGGTTCATTGCCGACT 321647 Query 518556 GATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAG 518615 | | ||||| |||||||| | || | | |||| ||||| || | |||||||||||| | Sbjct 321648 GGTTCTTGGCGGCATCTCCTACCAAACGCTCTGAATCTGTGAAAGCAACATATGATGGTG 321707 Query 518616 TTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTA 518675 | || || |||||||| ||||| ||||| ||||| ||| | || || ||| || | | Sbjct 321708 TGGTACGGTTACCTTGCTCATTGGCAATGATTTCTACTCTCTCACCTTCCCAAACTGCAA 321767 Query 518676 CACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 |||| | |||||||| | ||| ||||| ||||| Sbjct 321768 CACATGAGTATGTTGTTCCAAGATCGATACCGATAGC 321804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780818827122832