Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq7 197 2e-45 >seq7 Length=1083452 Score = 197 bits (218), Expect = 2e-45 Identities = 573/875 (65%), Gaps = 18/875 (2%) Strand=Plus/Minus Query 106448 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 106507 ||| || ||| || || ||||| ||||| |||||||| ||| ||| || || ||| Sbjct 949217 ACAAACGCTGGCAGTGCAATTGACGCCAAGTTGCAAACCGCCACCTCGTCGTTTGACGTG 949158 Query 106508 TACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 106567 ||||| | ||| ||||||||||| ||||| ||||| || || |||| |||| ||||| Sbjct 949157 TACTCGACAATCTCTGTACACAAATTGGAGCTCTTGATTGTACCCAGGTTCTGCTGGTTT 949098 Query 106568 CTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGAC 106627 ||| ||||||||||| ||||| |||||||| || || || || || |||| || Sbjct 949097 GACTTGCCATTGCACGCATCTTTGTACAGCATGTACGGTGTTCCTGTTTCAATCTGCGAG 949038 Query 106628 TTGAGAATTGCCTTCCACACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCG-- 106685 | ||||| || | ||||| | ||||| || | | ||| | ||||| | Sbjct 949037 TCCAGAATCGCGTACCACAGCTGCTGTGCTGGAACCTTCTTTCTTGCCAGCCCCTCTGTG 948978 Query 106686 -CCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGT 106744 ||||||||||||||| | || ||||||||||| ||| | ||| ||| ||| Sbjct 948977 TTCTCGTACTTTGTGTACAATGCCTCAAACTCCTCTCCCCAAACCTCGTGTAGATTTGGC 948918 Query 106745 GCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGG 106804 |||| || ||| ||||| | | ||| | | | ||| ||||||||||| || | Sbjct 948917 GCCTCGTGTGGGCAGAACAAACTCCAGTCCCTATTGTCCAGCACCCGCTTCATAAACAAA 948858 Query 106805 TCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTG 106864 || |||||||||| |||| | || | || ||| || | || ||||| Sbjct 948857 TCCGGAATCCACATTCCATAAAACAAGTCACGTGCCCTGTTCTCCTCCTTTCCGTGGTTC 948798 Query 106865 AGTCG-TAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGAT 106923 || ||||||| ||||| | ||| ||||||||||||||||| || || | || Sbjct 948797 TTGCGCAAACTCAA-AAACTCAAAGATGTCCGCGTGCCATGGCTCCAGGTATATCGC--- 948742 Query 106924 AGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATAC 106977 | || || | | | | || |||| | ||||| | ||||| ||| ||||| Sbjct 948741 AAATGCCCCTGGCCTCTTATTTCCTCCTTGGTCCACATACCTTGCTGTATGGTTGAATAC 948682 Query 106978 GCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCC--CCGAATACGAGATTTA 107035 || |||||||| | || |||| ||| || || || || | |||||| | | Sbjct 948681 TCGGAGCATTGGCACTATCCCATTCGATGTCCCGTTCGTTCCTGCTATGTACGAG-TCTG 948623 Query 107036 TTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCA 107095 || || || | | ||| | || ||||| || || || ||||||| || |||| Sbjct 948622 TT-GCCCTGATGTTATGCACACTCAGACCAATTCCTCCTGCTGACTTTGATATCATCGCA 948564 Query 107096 CACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAG 107155 || | | | || || | || || || | || ||||| |||| | | | | ||| Sbjct 948563 CATTGCTTCAGTGTATCGTAAATCCCTTCAATAGAGTCATCCTGCATCGTCAGCAAAAAG 948504 Query 107156 CAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATG 107215 || |||| |||||| | | |||||| | || || || ||||||| || || | Sbjct 948503 CACGACGACAACTGCGGACGCGTTGTACCCGAGTTAAACAGCGTTGGTGAGGCATGCGTA 948444 Query 107216 AACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGG 107275 |||| || |||||| ||| || ||||| | || || || || || ||||| ||| Sbjct 948443 AACAGCTTCTGCGACATCATGTTATACGTCTCAATAACCGACTCTATATCGTCCCCATGG 948384 Query 107276 ATGCCGATGGCCACACGCATAAACATGTATTGGGG 107310 || || | | || | ||||| || ||| || || Sbjct 948383 ATCCCAACGCTAACTCTCATAATCAAGTACTGTGG 948349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980269017280