Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq13 95.1 1e-14 >seq13 Length=444513 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 153261 CTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGA 153320 ||||| || || || |||||||| ||||| || || || | |||||||| ||||| Sbjct 129816 CTTGAAAACCCAAGCTGGTACACGCAGTACACACCGTACCAGCCAGAGATATCGCAGGGT 129875 Query 153321 AGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATA 153380 |||||||| ||| | |||||||||||||| | || || | || || | |||||| Sbjct 129876 AGATTGGAGAGTTTGCTGAATTACCAAACGCTGGTGACGGATTTGACGGGGCTTCCAATA 129935 Query 153381 GCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAG 153417 ||||| ||| | | || ||||| | ||| ||||||| Sbjct 129936 GCAAATGCAAGTTTGTTGGATGAGGGAACAGCAGCAG 129972 Score = 93.3 bits (102), Expect = 5e-14 Identities = 204/304 (67%), Gaps = 4/304 (1%) Strand=Plus/Plus Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806 ||||| | ||| || | | ||||||||||| | | | || || || || || || Sbjct 130308 GATATAGTTGTTGGAAACAGTCAAAGGTTTGGAGTGTCGCTTGGGTACGGGGGGCCACAC 130367 Query 153807 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 153866 || || || ||||| | || | ||||| ||| || || || ||| | || || Sbjct 130368 GCAGCGTTTTTTGCGTGTTCTGATGCGCATAAGCGAAGAATTCCAGGAAGATTGGTTGG- 130426 Query 153867 CAGTCAGTA--GATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGC 153924 ||| |||| || | | || | ||| |||||| | || || ||||| | |||| Sbjct 130427 -AGTTAGTAAGGACACAAAGGGGAGAGTAGCTTACAGACTGGCGCTTCAGACACGCGAGC 130485 Query 153925 AGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTA 153984 | |||||||| ||||| || ||||| |||||||| ||||| || ||||| |||||||| | Sbjct 130486 AACATATCAGAAGAGAGAAGGCAACAAGTAACATTTGCACTGCACAGGCGCTGCTGGCAA 130545 Query 153985 ATATGTCTGGATTCTATGCAGCATATCATGGTGCAGATGGACTACATGCTATAGCAAGAA 154044 | || | | | || |||| || ||||| |||| || || | | ||| || | | Sbjct 130546 ACATAGCAGCGATGTACGCAGTGTACCATGGGCCAGAAGGGCTTAAGGATATTGCGAACA 130605 Query 154045 GAAT 154048 |||| Sbjct 130606 GAAT 130609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212278708480