Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq13 107 2e-18 >seq13 Length=444513 Score = 107 bits (118), Expect = 2e-18 Identities = 197/284 (69%), Gaps = 6/284 (2%) Strand=Plus/Plus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 ||||||||||| | | | || ||||| || || || || || || ||||| | Sbjct 130329 CAAAGGTTTGGAGTGTCGCTTGGGTACGGGGGGCCACACGCAGCGTTTTTTGCGTGTTCT 130388 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTA--GATAGCGAAG 158560 || | ||||| ||| || || || ||| | || || ||| |||| || | | ||| Sbjct 130389 GATGCGCATAAGCGAAGAATTCCAGGAAGATTGGTTGG--AGTTAGTAAGGACA-CAAAG 130445 Query 158561 GTAATAA-AGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAA 158619 | | | ||| |||||| | || || ||||| | ||||| |||||||||||||| || Sbjct 130446 GGGAGAGTAGCTTACAGACTGGCGCTTCAGACACGCGAGCAACATATCAGAAGAGAGAAG 130505 Query 158620 GCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCA 158679 ||||| |||||||| ||||| ||||| || |||||||| || || | | | | || ||| Sbjct 130506 GCAACAAGTAACATTTGCACTGCACAGGCGCTGCTGGCAAACATAGCAGCGATGTACGCA 130565 Query 158680 GCATATCATGGTGCAGATGGACTACATGCTATAGCAAGAAGAAT 158723 | || ||||| |||| || || | | ||| || | ||||| Sbjct 130566 GTGTACCATGGGCCAGAAGGGCTTAAGGATATTGCGAACAGAAT 130609 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 157936 CTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGA 157995 ||||| || || || |||||||| ||||| || || || | |||||||| ||||| Sbjct 129816 CTTGAAAACCCAAGCTGGTACACGCAGTACACACCGTACCAGCCAGAGATATCGCAGGGT 129875 Query 157996 AGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATA 158055 |||||||| ||| | |||||||||||||| | || || | || || || || ||| Sbjct 129876 AGATTGGAGAGTTTGCTGAATTACCAAACGCTGGTGACGGATTTGACGGGGCTTCCAATA 129935 Query 158056 GCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAG 158092 ||||| ||| | | || ||||| | ||| ||||||| Sbjct 129936 GCAAATGCAAGTTTGTTGGATGAGGGAACAGCAGCAG 129972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050670753920