Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq9 87.8 2e-12 >seq9 Length=500114 Score = 87.8 bits (96), Expect = 2e-12 Identities = 106/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 22474 TTGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGA 22533 |||||||||||||||||| |||||||||| |||||||| || || | | |||||||| Sbjct 426892 TTGGGGAATTAGCTCAGT-GGTAGAGCGCTCGCTTTGCATGCGAGAGGCCGCGAGTTCGA 426950 Query 22534 GTCTCCTATTCTCCACTCAATCCTCTTTAGCTC-AGCGGTAGAGCGGTTGACTGTTAATC 22592 ||| |||||||| | | || |||||| | |||||||||| |||| |||||| Sbjct 426951 TCCTCGCATTCTCCAAACTAGCCCGGCTAGCTCAATCGGTAGAGCGTAAGACTCTTAATC 427010 Query 22593 AATTGGTCCCTGGTTCGATCCC 22614 ||| | ||||||| ||| Sbjct 427011 TTAAGGTTGCGGGTTCGACCCC 427032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560607495452800