Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq16 152 6e-32 >seq16 Length=823159 Score = 152 bits (168), Expect = 6e-32 Identities = 522/808 (65%), Gaps = 18/808 (2%) Strand=Plus/Plus Query 36899 AACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCCATAAAATCAAA 36958 ||| ||| |||||||||| || ||||| |||| | ||| || | |||||||| ||||| Sbjct 376807 AACACGTTTTTCGAAAAAGTTGGTCTTGCCTTGCATTGAAATCATGTCCATAAAGTCAAA 376866 Query 36959 TGGATT-----AGATGTATTATATATAGTACTACATGATAATTCCTTCAGAAGCCTATCC 37013 |||||| || |||| | | | || | || || | | || || ||||| Sbjct 376867 TGGATTCTGCGAGTTGTAGTGTTTGGAGAATCCCA-GAG----CTATGAGCAGTCTATCG 376921 Query 37014 GCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTACTGGA 37073 |||||||| || ||||||| ||||| ||| || ||| || || || || |||||| Sbjct 376922 GCAACAAACTCAATGTATTGGCACATCAGTGCACTGTTCATTCCGATCAGCGATACTGGC 376981 Query 37074 ATTGCATCT-TGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAACAAT 37132 | | ||| | ||||| | || ||| || | ||||| || || | | | | | Sbjct 376982 AACGACTCTGTCAAGAACTT-TTGTTCAATGACAACAGCCTC---AAGCACAATGCCCCT 377037 Query 37133 AACTT---CTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCACA 37189 || | | |||| || | | | || | || | | ||| ||||| || Sbjct 377038 GACCTTGGCCTCAGAAGGCTTGTTGCTGAGATGGCTGAATAGCAGACAGGCAAAGTCTGT 377097 Query 37190 ATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACC 37249 ||||| |||||||| | | || | ||||| || || || | ||||||||| | || Sbjct 377098 GTGTAACCCTTCATCGCGGCAAATAAGCTCATTGGAGAATGTAAGTCCTGGCATCAGCCC 377157 Query 37250 TCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGC 37309 ||| ||||| | ||| || ||||||||||| ||||| |||||||||||||| |||||| | Sbjct 377158 TCTCTTTTTGAGCCAGAAAATTGCTGCAAACGATCCTGAAAAGAAAATACCCTCAACTAC 377217 Query 37310 TGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGT 37369 |||||| || | | ||| ||| || | || || ||| |||||| || | Sbjct 377218 TGCAAACGCCGCCAAACGCTCACCAAATGGTGCCTCATCGTCATCAATCCACTTCAGGGC 377277 Query 37370 CCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGttttt 37429 ||| | ||||||| | || || ||| | |||||||| || || || ||| || Sbjct 377278 CCACTTTGCCTTTTCTCCAATGCACGGAATGTTGTCAATTGCGTTAAACAGGTGGTTCTT 377337 Query 37430 ttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATT 37489 ||| | |||| || || || || | || | |||||||| |||||| || Sbjct 377338 CTCTGCCTCATCTTGAATGTATGTGTCCAGCAGCAGTGAGTACATTTCGCTGTGAATGTT 377397 Query 37490 TTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAA 37549 ||||| || || || ||||| ||||| || || || | | || || || || Sbjct 377398 CTCAATCATGATTTGGAACCCATAGAAACATCTTGCCTCTGGAATCTGTACCTCATTGCT 377457 Query 37550 AAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAAC 37609 ||| | | | | ||||||||| || || ||||| || |||||||| || || | Sbjct 377458 AAAGTTGCTCACCAGGTTTTCATTGACAATTCCATCCGAGGCAGCAAAGAATGCTAGGAT 377517 Query 37610 ATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGA 37669 | || ||||| | | || | | ||| | |||| ||| | | | || | ||| Sbjct 377518 GTTCTTGATAAAGTAACGCTCGTGTTCTGAAAGCTTTTCCCAGTGTATTTTGTCATGTGA 377577 Query 37670 TAAATCAACTTCATCAACGGTCCAAAAA 37697 | ||| || || ||| || |||| ||| Sbjct 377578 GAGATCCACCTCCTCAGCGTTCCAGAAA 377605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316266914880