Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq7 194 3e-44 seq16 138 2e-27 >seq7 Length=1083452 Score = 194 bits (214), Expect = 3e-44 Identities = 619/942 (66%), Gaps = 26/942 (3%) Strand=Plus/Minus Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773 |||| ||| || || ||||||||||| || || |||| | ||||||||||| | Sbjct 949193 GCCAAGTTGCAAACCGCCACCTCGTCGTTTGACGTGTACTCGACAATCTCTGTACACAAA 949134 Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTG 221833 ||| || |||||| || ||||||| | || || ||||||| |||| || || ||| Sbjct 949133 TTGGAGCTCTTGATTGTACCCAGGTTCTGCTGGTTTGACTTGCCATTGCACGCATCTTTG 949074 Query 221834 TAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCT 221893 || ||||| | || || || || | ||| | |||||||| || ||| || | Sbjct 949073 TACAGCATGTACGGTGTTCCTGTTTCAATCTGCGAGTCCAGAATCGCGTACCACAGCTG- 949015 Query 221894 CTG-GCGCTCACCGTCCT-CTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCA 221951 ||| || ||| || | |||| | || ||||| || || || ||| || || | | Sbjct 949014 CTGTGCTGGAACCTTCTTTCTTGCCAGC-CCCTCTGTGTTCTCGTACTTTGTGTACA--A 948958 Query 221952 TG--TCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCG-GGACACATCA 222008 || ||||||| || || | |||||| || ||| | ||| | | || || | || Sbjct 948957 TGCCTCAAACTCCTCTCCCCAAACCTCGTGTAGATTTGG-CGCCTCGTGTGGGCAGAACA 948899 Query 222009 GACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCT 222068 |||||||| | | ||||| |||| || ||| || | ||||| ||||||| | | Sbjct 948898 AACTCCAGTCCCTATTGTCCAGCACCCGCTTCATAAACAAATCCGGAATCCACATTCCAT 948839 Query 222069 GAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACT 222128 ||| | || | | || | ||||||| |||| ||| || | || | |||||||| Sbjct 948838 AAAACAAGTCACGTGCCCTGTTCTCCTCCTTTCCGTGGTTCTTGCGCAAACTCAAAAACT 948779 Query 222129 CAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGC 222188 |||| ||||| |||||||| |||||||| || | || | || || || | ||| || | Sbjct 948778 CAAAGATGTCCGCGTGCCATGGCTCCAGGTATATCGCAAATGCCCCTGGCCTCTTATTTC 948719 Query 222189 CACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGT 222248 | || || ||||| ||| | | |||||| | || || | || || | || | Sbjct 948718 CTCCTTGGTCCACATACCTTGCTGTATGGTTGAATACTCGGAGCATTGGCACTATCCCAT 948659 Query 222249 TGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACA 222308 | ||| ||||| || || ||||||| | ||||| | |||| || || Sbjct 948658 TCGATGTCCCGTTCGTTCCTGCTATGTACGAGTCTGTTGCCCTGATGTTATGCACACTCA 948599 Query 222309 TGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGC 222368 || || || || || || || ||||| || || ||| || || || || | Sbjct 948598 GACCAATTCCTCCTGCTGACTTTGATATCATCGCACATTGCTTCAGTGTATCGTAAATCC 948539 Query 222369 CCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGG 222428 | || |||||||| |||| | |||||| ||| || ||||||| ||| | || | Sbjct 948538 CTTCAATAGAGTCATCCTGCATCGTCAGCAAAAAGCACGACGACAACTGCGGACGCGTTG 948479 Query 222429 AACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCT-AGACATCAGATCG 222487 || | |||||||||||| || ||| || ||||| ||| || ||||||| | Sbjct 948478 TACCCGAGTTAAACAGCGTTGGTGAGGCATGCGTAAA-CAGCTTCTGCGACATCATGTTA 948420 Query 222488 TACGTCTCTA----CGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCA-TCTCA 222542 |||||||| | ||||||| || | |||||| || ||| || || | ||||| Sbjct 948419 TACGTCTCAATAACCGACTCT----ATATCGTCCCCATGGATC-CCAACGCTAACTCTCA 948365 Query 222543 TGTACATGTACTGGGGCCTCTCCACAGG--ACCCTTGGAGCTGGAGAGCAGGTACGATTT 222600 | || |||||| ||||||||| | || ||| | | | | || |||||| | Sbjct 948364 TAATCAAGTACTGTGGCCTCTCCGCTGGCTTCCCGTCTA--TCCTCAACAAGTACGACCT 948307 Query 222601 TTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCT 222642 ||||| |||||||| |||||||| ||| |||| ||||| Sbjct 948306 CTCCAGTGTCTTGAATCCAAAGTAATTGTATCCAAAATCTCT 948265 >seq16 Length=823159 Score = 138 bits (152), Expect = 2e-27 Identities = 542/848 (64%), Gaps = 15/848 (2%) Strand=Plus/Minus Query 25480 TGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGGCC 25539 ||| | |||||||| ||||| || || ||||| ||| || ||| | ||||| | Sbjct 377634 TGGAATATGTACAAAAAGGCGGAAGCGTCTTTCTGGAACGCTGAGGAGGTGGATCTCTCA 377575 Query 25540 AAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTACGTG 25599 | |||| |||| | || || || |||||| | ||| ||||| || | Sbjct 377574 CATGACAAAATACACTGGGAAAAGCTTTCAGAACACGAGCGTTACTTTATCAAGAACATC 377515 Query 25600 TTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA-TTCAC 25658 | ||||||||||| ||||| ||||| || || || || || ||| | ||| | || | Sbjct 377514 CTAGCATTCTTTGCTGCCTCGGATGGAATTGTCAATGAAAACCTG-GTGAGCAACTTTAG 377456 Query 25659 CAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAA 25718 || || || ||| ||||| | |||||||| || ||||| || || || || Sbjct 377455 CAATGAGGTACAGATTCCAGAGGCAAGATGTTTCTATGGGTTCCAAATCATGATTGAGAA 377396 Query 25719 TGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCCGAGAG 25778 | ||| || |||| | ||| ||| || |||||| ||| | || |||| Sbjct 377395 CATTCACAGCGAAATGTACTCACTGCTGCTGGACACATACATTCAAGATGAGGCAGAGAA 377336 Query 25779 AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAA-GGCGCGGTGGG 25837 | | |||||| || || || |||| || |||| ||| || ||| ||||| Sbjct 377335 GAACCACCTGTTTAACGCAATTGACAACATTCCGTGCATTG-GAGAAAAGGCAAAGTGGG 377277 Query 25838 CCATGAAGTGGATCAACAGCCA-GAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCT 25896 || |||||||||| | | | ||| || | ||||| ||||| ||| || ||||| Sbjct 377276 CCCTGAAGTGGATTGATGACGATGAG-GCACCATTTGGTGAGCGTTTGGCGGCGTTTGCA 377218 Query 25897 GCTGTGGAGGGCATCTT--TTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGA 25954 | || ||||| || || |||||| | |||||||| || || ||||||||||| ||| Sbjct 377217 GTAGTTGAGGGTATTTTCTTTTCAG--GATCGTTTGCAGCAATTTTCTGGCTCAAAAAGA 377160 Query 25955 AGGGGACCATGCCCGGGCTGTAC-TTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013 ||| ||||| || || ||| || ||||| ||||| || || | || || || | Sbjct 377159 GAGGGCTGATGCCAGGACT-TACATTCTCCAATGAGCTTATTTGCCGCGATGAAGGGTTA 377101 Query 26014 CACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAGAG 26073 |||| ||| |||||||| ||||| | || |||| | | |||| |||||| | | Sbjct 377100 CACACAGACTTTGCCTGTCTGCTATTCA---GCCATCTCAGCAACAAGCCTTCTGAGGCC 377044 Query 26074 ACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNNNN 26133 | ||| | || | |||||||| | || || | |||| Sbjct 377043 AAGGTCAGGGGCATTGTGCTTGAGGCTGTTGTCATTGAACAAAAGTTCTTGACAGAGTCG 376984 Query 26134 NNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTATGTG 26193 | || ||||||| ||| ||| ||||||||||||||| ||| Sbjct 376983 TTGCCAGTATCGCTGATCGGAATGAACAGTGCACTGATGTGCCAATACATTGAGTTTGTT 376924 Query 26194 GCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACCCGTTC 26253 ||||| ||||| |||||| || ||| || ||||| ||| || || || Sbjct 376923 GCCGATAGACTGCTCATAGCTCTGGGATTCTCCAAACACTACAACTCGCAGAATCCATTT 376864 Query 26254 GACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGGC 26313 ||||||||||| | || || || |||| ||||||||||| || ||||| | || | Sbjct 376863 GACTTTATGGACATGATTTCAATGCAAGGCAAGACCAACTTTTTCGAAAAACGTGTTTCC 376804 Query 26314 GACTATCA 26321 ||||| || Sbjct 376803 GACTACCA 376796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843964039680