Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq7 104 1e-17 >seq7 Length=1083452 Score = 104 bits (114), Expect = 1e-17 Identities = 282/431 (65%), Gaps = 8/431 (2%) Strand=Plus/Minus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 || |||||| ||||| |||||||||||| ||||||| || || | || || | || || Sbjct 948870 CTTCATAAACAAATCCGGAATCCACATTCCATAAAACAAGTCACGTGCCCTGTTCTCCTC 948811 Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049 |||||||| ||||| | | || || ||||| || || | ||||||||| || | Sbjct 948810 CTTTCCGTGGTTCTTGCGCAAACTCAAAAACTCAAAGATGTCCGCGTGCCATGGCTCCAG 948751 Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109 || || ||||| ||| || || ||| ||||| || || || ||||| || | Sbjct 948750 GTATATCGCAAATGCCCCTGGCCTCTTATTTCCTCCTTGGTCCACATACCTTGCTGTATG 948691 Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTG----TGCTATGAA 26165 ||||| ||| | |||||| |||| ||| | || ||||| | ||||||| Sbjct 948690 GTTGAATACTCGGAGCATTGGCACTATCCCATTCGATGTCCCGTTCGTTCCTGCTATG-- 948633 Query 26166 TCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTG 26225 | || |||| | || || | || || | ||| ||||| || || | |||| Sbjct 948632 --TACGAGTCTGTTGCCCTGATGTTATGCACACTCAGACCAATTCCTCCTGCTGACTTTG 948575 Query 26226 AAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTC 26285 | || ||||| | | ||||||| |||| |||| || ||| | | ||| Sbjct 948574 ATATCATCGCACATTGCTTCAGTGTATCGTAAATCCCTTCAATAGAGTCATCCTGCATCG 948515 Query 26286 CTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTG 26345 | ||||| || || || || |||| | | ||||| || || ||||| | || |||| Sbjct 948514 TCAGCAAAAAGCACGACGACAACTGCGGACGCGTTGTACCCGAGTTAAACAGCGTTGGTG 948455 Query 26346 TAGCATGAGTA 26356 ||||| ||| Sbjct 948454 AGGCATGCGTA 948444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039777957400